Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants
Pectobacterium cacticida (formerly Erwinia cacticida) causes soft rot disease of cactus plants. Its taxonomic status within the genus Pectobacterium remains questionable because no whole genome sequence of this species is available in public databases for reliable taxonomic analyses. Here, we presen...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
The American Phytopathological Society
2023-09-01
|
| Series: | PhytoFrontiers |
| Subjects: | |
| Online Access: | https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-11-22-0133-A |
| _version_ | 1827095698557894656 |
|---|---|
| author | Ting Xie Huajie Zhu Tianlan Liao Yan Liang Qianli An |
| author_facet | Ting Xie Huajie Zhu Tianlan Liao Yan Liang Qianli An |
| author_sort | Ting Xie |
| collection | DOAJ |
| description | Pectobacterium cacticida (formerly Erwinia cacticida) causes soft rot disease of cactus plants. Its taxonomic status within the genus Pectobacterium remains questionable because no whole genome sequence of this species is available in public databases for reliable taxonomic analyses. Here, we present the complete genome sequence of the P. cacticida type strain CFCC 10813T (=1-12T = ATCC 49481T). P. cacticida can be classified into the genus Pectobacterium because it is on the deepest basal phylogenomic branch of the genus Pectobacterium, and its genome relatedness to other Pectobacterium species is at the border for the genus delimitation boundaries. This complete genome sequence provides the genome resource for elucidating P. cacticida pathogenicity and adaptation to plant hosts and environments. [Figure: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license. |
| first_indexed | 2024-03-08T06:33:40Z |
| format | Article |
| id | doaj.art-c098177e09164055b1925f6f2fe98977 |
| institution | Directory Open Access Journal |
| issn | 2690-5442 |
| language | English |
| last_indexed | 2025-03-20T07:04:01Z |
| publishDate | 2023-09-01 |
| publisher | The American Phytopathological Society |
| record_format | Article |
| series | PhytoFrontiers |
| spelling | doaj.art-c098177e09164055b1925f6f2fe989772024-10-01T12:35:47ZengThe American Phytopathological SocietyPhytoFrontiers2690-54422023-09-013245646010.1094/PHYTOFR-11-22-0133-AComplete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus PlantsTing Xie0Huajie Zhu1Tianlan Liao2Yan Liang3Qianli An4State Key Laboratory of Rice Biology, Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Zhejiang Province Key Laboratory of Biology of Crop Pathogens and Insects, Institute of Biotechnology, College of Agricultural and Biotechnology, Zhejiang University, Hangzhou 310058, ChinaState Key Laboratory of Rice Biology, Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Zhejiang Province Key Laboratory of Biology of Crop Pathogens and Insects, Institute of Biotechnology, College of Agricultural and Biotechnology, Zhejiang University, Hangzhou 310058, ChinaState Key Laboratory of Rice Biology, Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Zhejiang Province Key Laboratory of Biology of Crop Pathogens and Insects, Institute of Biotechnology, College of Agricultural and Biotechnology, Zhejiang University, Hangzhou 310058, ChinaState Key Laboratory of Rice Biology, Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Zhejiang Province Key Laboratory of Biology of Crop Pathogens and Insects, Institute of Biotechnology, College of Agricultural and Biotechnology, Zhejiang University, Hangzhou 310058, ChinaState Key Laboratory of Rice Biology, Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Zhejiang Province Key Laboratory of Biology of Crop Pathogens and Insects, Institute of Biotechnology, College of Agricultural and Biotechnology, Zhejiang University, Hangzhou 310058, ChinaPectobacterium cacticida (formerly Erwinia cacticida) causes soft rot disease of cactus plants. Its taxonomic status within the genus Pectobacterium remains questionable because no whole genome sequence of this species is available in public databases for reliable taxonomic analyses. Here, we present the complete genome sequence of the P. cacticida type strain CFCC 10813T (=1-12T = ATCC 49481T). P. cacticida can be classified into the genus Pectobacterium because it is on the deepest basal phylogenomic branch of the genus Pectobacterium, and its genome relatedness to other Pectobacterium species is at the border for the genus delimitation boundaries. This complete genome sequence provides the genome resource for elucidating P. cacticida pathogenicity and adaptation to plant hosts and environments. [Figure: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-11-22-0133-APectobacteriumsoft rot Pectobacteriaceaetaxonogenomics |
| spellingShingle | Ting Xie Huajie Zhu Tianlan Liao Yan Liang Qianli An Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants PhytoFrontiers Pectobacterium soft rot Pectobacteriaceae taxonogenomics |
| title | Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants |
| title_full | Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants |
| title_fullStr | Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants |
| title_full_unstemmed | Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants |
| title_short | Complete Genome Sequence Resource of the Pathogen Pectobacterium cacticida CFCC 10813T Causing Soft Rot Diseases of Cactus Plants |
| title_sort | complete genome sequence resource of the pathogen pectobacterium cacticida cfcc 10813t causing soft rot diseases of cactus plants |
| topic | Pectobacterium soft rot Pectobacteriaceae taxonogenomics |
| url | https://apsjournals.apsnet.org/doi/10.1094/PHYTOFR-11-22-0133-A |
| work_keys_str_mv | AT tingxie completegenomesequenceresourceofthepathogenpectobacteriumcacticidacfcc10813tcausingsoftrotdiseasesofcactusplants AT huajiezhu completegenomesequenceresourceofthepathogenpectobacteriumcacticidacfcc10813tcausingsoftrotdiseasesofcactusplants AT tianlanliao completegenomesequenceresourceofthepathogenpectobacteriumcacticidacfcc10813tcausingsoftrotdiseasesofcactusplants AT yanliang completegenomesequenceresourceofthepathogenpectobacteriumcacticidacfcc10813tcausingsoftrotdiseasesofcactusplants AT qianlian completegenomesequenceresourceofthepathogenpectobacteriumcacticidacfcc10813tcausingsoftrotdiseasesofcactusplants |