pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved]
The pdb-tools are a collection of Python scripts for working with molecular structure data in the Protein Data Bank (PDB) format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner. The pdb-tools are implemented in Python, without any e...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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F1000 Research Ltd
2018-12-01
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| Series: | F1000Research |
| Online Access: | https://f1000research.com/articles/7-1961/v1 |
| _version_ | 1819054553455132672 |
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| author | João P. G. L. M. Rodrigues João M.C. Teixeira Mikaël Trellet Alexandre M. J. J. Bonvin |
| author_facet | João P. G. L. M. Rodrigues João M.C. Teixeira Mikaël Trellet Alexandre M. J. J. Bonvin |
| author_sort | João P. G. L. M. Rodrigues |
| collection | DOAJ |
| description | The pdb-tools are a collection of Python scripts for working with molecular structure data in the Protein Data Bank (PDB) format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner. The pdb-tools are implemented in Python, without any external dependencies, and are freely available under the open-source Apache License at https://github.com/haddocking/pdb-tools/ and on PyPI. |
| first_indexed | 2024-12-21T12:53:27Z |
| format | Article |
| id | doaj.art-c0deeab074e64b42a60af7f00842dc19 |
| institution | Directory Open Access Journal |
| issn | 2046-1402 |
| language | English |
| last_indexed | 2024-12-21T12:53:27Z |
| publishDate | 2018-12-01 |
| publisher | F1000 Research Ltd |
| record_format | Article |
| series | F1000Research |
| spelling | doaj.art-c0deeab074e64b42a60af7f00842dc192022-12-21T19:03:25ZengF1000 Research LtdF1000Research2046-14022018-12-01710.12688/f1000research.17456.119090pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved]João P. G. L. M. Rodrigues0João M.C. Teixeira1Mikaël Trellet2Alexandre M. J. J. Bonvin3Structural Biology, Stanford University School of Medicine, Stanford, California, 94305, USAIndependent Researcher, Salamanca, SpainBijvoet Center for Biomolecular Research, Utrecht University, Utrecht, 3584CH, The NetherlandsBijvoet Center for Biomolecular Research, Utrecht University, Utrecht, 3584CH, The NetherlandsThe pdb-tools are a collection of Python scripts for working with molecular structure data in the Protein Data Bank (PDB) format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner. The pdb-tools are implemented in Python, without any external dependencies, and are freely available under the open-source Apache License at https://github.com/haddocking/pdb-tools/ and on PyPI.https://f1000research.com/articles/7-1961/v1 |
| spellingShingle | João P. G. L. M. Rodrigues João M.C. Teixeira Mikaël Trellet Alexandre M. J. J. Bonvin pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved] F1000Research |
| title | pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved] |
| title_full | pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved] |
| title_fullStr | pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved] |
| title_full_unstemmed | pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved] |
| title_short | pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved] |
| title_sort | pdb tools a swiss army knife for molecular structures version 1 referees 2 approved |
| url | https://f1000research.com/articles/7-1961/v1 |
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