Longitudinal profiles of the fecal metabolome during the first 2 years of life

Abstract During the first 2 years of life, the infant gut microbiome is rapidly developing, and gut bacteria may impact host health through the production of metabolites that can have systemic effects. Thus, the fecal metabolome represents a functional readout of gut bacteria. Despite the important...

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Main Authors: Elizabeth A. Holzhausen, Natalie Shen, Bridget Chalifour, ViLinh Tran, Zhenjiang Li, Jeremy A. Sarnat, Howard H. Chang, Dean P. Jones, Michael I. Goran, Donghai Liang, Tanya L. Alderete
Format: Article
Language:English
Published: Nature Portfolio 2023-02-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-023-28862-z
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author Elizabeth A. Holzhausen
Natalie Shen
Bridget Chalifour
ViLinh Tran
Zhenjiang Li
Jeremy A. Sarnat
Howard H. Chang
Dean P. Jones
Michael I. Goran
Donghai Liang
Tanya L. Alderete
author_facet Elizabeth A. Holzhausen
Natalie Shen
Bridget Chalifour
ViLinh Tran
Zhenjiang Li
Jeremy A. Sarnat
Howard H. Chang
Dean P. Jones
Michael I. Goran
Donghai Liang
Tanya L. Alderete
author_sort Elizabeth A. Holzhausen
collection DOAJ
description Abstract During the first 2 years of life, the infant gut microbiome is rapidly developing, and gut bacteria may impact host health through the production of metabolites that can have systemic effects. Thus, the fecal metabolome represents a functional readout of gut bacteria. Despite the important role that fecal metabolites may play in infant health, the development of the infant fecal metabolome has not yet been thoroughly characterized using frequent, repeated sampling during the first 2 years of life. Here, we described the development of the fecal metabolome in a cohort of 101 Latino infants with data collected at 1-, 6-, 12-, 18-, and 24-months of age. We showed that the fecal metabolome is highly conserved across time and highly personalized, with metabolic profiles being largely driven by intra-individual variability. Finally, we also identified several novel metabolites and metabolic pathways that changed significantly with infant age, such as valerobetaine and amino acid metabolism, among others.
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spelling doaj.art-c1a147d4df544f02b94276482c85bd032023-02-05T12:12:05ZengNature PortfolioScientific Reports2045-23222023-02-0113111210.1038/s41598-023-28862-zLongitudinal profiles of the fecal metabolome during the first 2 years of lifeElizabeth A. Holzhausen0Natalie Shen1Bridget Chalifour2ViLinh Tran3Zhenjiang Li4Jeremy A. Sarnat5Howard H. Chang6Dean P. Jones7Michael I. Goran8Donghai Liang9Tanya L. Alderete10Department of Integrative Physiology, University of Colorado – BoulderRollins School of Public Health, Emory UniversityDepartment of Integrative Physiology, University of Colorado – BoulderSchool of Medicine, Emory UniversityRollins School of Public Health, Emory UniversityRollins School of Public Health, Emory UniversityRollins School of Public Health, Emory UniversitySchool of Medicine, Emory UniversityChildren’s Hospital Los AngelesRollins School of Public Health, Emory UniversityDepartment of Integrative Physiology, University of Colorado – BoulderAbstract During the first 2 years of life, the infant gut microbiome is rapidly developing, and gut bacteria may impact host health through the production of metabolites that can have systemic effects. Thus, the fecal metabolome represents a functional readout of gut bacteria. Despite the important role that fecal metabolites may play in infant health, the development of the infant fecal metabolome has not yet been thoroughly characterized using frequent, repeated sampling during the first 2 years of life. Here, we described the development of the fecal metabolome in a cohort of 101 Latino infants with data collected at 1-, 6-, 12-, 18-, and 24-months of age. We showed that the fecal metabolome is highly conserved across time and highly personalized, with metabolic profiles being largely driven by intra-individual variability. Finally, we also identified several novel metabolites and metabolic pathways that changed significantly with infant age, such as valerobetaine and amino acid metabolism, among others.https://doi.org/10.1038/s41598-023-28862-z
spellingShingle Elizabeth A. Holzhausen
Natalie Shen
Bridget Chalifour
ViLinh Tran
Zhenjiang Li
Jeremy A. Sarnat
Howard H. Chang
Dean P. Jones
Michael I. Goran
Donghai Liang
Tanya L. Alderete
Longitudinal profiles of the fecal metabolome during the first 2 years of life
Scientific Reports
title Longitudinal profiles of the fecal metabolome during the first 2 years of life
title_full Longitudinal profiles of the fecal metabolome during the first 2 years of life
title_fullStr Longitudinal profiles of the fecal metabolome during the first 2 years of life
title_full_unstemmed Longitudinal profiles of the fecal metabolome during the first 2 years of life
title_short Longitudinal profiles of the fecal metabolome during the first 2 years of life
title_sort longitudinal profiles of the fecal metabolome during the first 2 years of life
url https://doi.org/10.1038/s41598-023-28862-z
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