SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION
This paper describes the development of an approach to the simulation of prokaryotic community activity and evolution and the software package «Haploid evolutionary constructor» (http://evol-constructor.bionet.nsc.ru). The initial model with ideal mixing (0D) is expanded to a spatially distributed m...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders
2014-12-01
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| Series: | Вавиловский журнал генетики и селекции |
| Subjects: | |
| Online Access: | https://vavilov.elpub.ru/jour/article/view/81 |
| _version_ | 1797214245381734400 |
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| author | S. A. Lashin E. A. Mamontova Yu. G. Matushkin |
| author_facet | S. A. Lashin E. A. Mamontova Yu. G. Matushkin |
| author_sort | S. A. Lashin |
| collection | DOAJ |
| description | This paper describes the development of an approach to the simulation of prokaryotic community activity and evolution and the software package «Haploid evolutionary constructor» (http://evol-constructor.bionet.nsc.ru). The initial model with ideal mixing (0D) is expanded to a spatially distributed model (1D). The 0D and 1D poisoner–prey prokaryotic community models are compared. It is shown that the community stability is influenced by the spatial distribution of substrates and prokaryotic cells. |
| first_indexed | 2024-03-07T16:08:28Z |
| format | Article |
| id | doaj.art-c1f13e53d4c440d09d54736907da1f50 |
| institution | Directory Open Access Journal |
| issn | 2500-3259 |
| language | English |
| last_indexed | 2024-04-24T11:11:06Z |
| publishDate | 2014-12-01 |
| publisher | Siberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and Breeders |
| record_format | Article |
| series | Вавиловский журнал генетики и селекции |
| spelling | doaj.art-c1f13e53d4c440d09d54736907da1f502024-04-11T15:30:52ZengSiberian Branch of the Russian Academy of Sciences, Federal Research Center Institute of Cytology and Genetics, The Vavilov Society of Geneticists and BreedersВавиловский журнал генетики и селекции2500-32592014-12-01164/183083765SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTIONS. A. Lashin0E. A. Mamontova1Yu. G. Matushkin2Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk National Research State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk National Research State University, Novosibirsk, RussiaInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia Novosibirsk National Research State University, Novosibirsk, RussiaThis paper describes the development of an approach to the simulation of prokaryotic community activity and evolution and the software package «Haploid evolutionary constructor» (http://evol-constructor.bionet.nsc.ru). The initial model with ideal mixing (0D) is expanded to a spatially distributed model (1D). The 0D and 1D poisoner–prey prokaryotic community models are compared. It is shown that the community stability is influenced by the spatial distribution of substrates and prokaryotic cells.https://vavilov.elpub.ru/jour/article/view/81evolution modelingbacterial communityspatial distributiondiffusion |
| spellingShingle | S. A. Lashin E. A. Mamontova Yu. G. Matushkin SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION Вавиловский журнал генетики и селекции evolution modeling bacterial community spatial distribution diffusion |
| title | SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION |
| title_full | SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION |
| title_fullStr | SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION |
| title_full_unstemmed | SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION |
| title_short | SPATIALLY DISTRIBUTED MODELING OF PROKARYOTIC COMMUNITY EVOLUTION |
| title_sort | spatially distributed modeling of prokaryotic community evolution |
| topic | evolution modeling bacterial community spatial distribution diffusion |
| url | https://vavilov.elpub.ru/jour/article/view/81 |
| work_keys_str_mv | AT salashin spatiallydistributedmodelingofprokaryoticcommunityevolution AT eamamontova spatiallydistributedmodelingofprokaryoticcommunityevolution AT yugmatushkin spatiallydistributedmodelingofprokaryoticcommunityevolution |