The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
Callicarpa integerrima var. chinensis is one of the traditional medical herbs which has the potential for multiple diseases’ treatment. In this study, the complete chloroplast genome sequence of C. integerrima var. chinensis was sequenced and assembled. A typical quadripartite structure was observed...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1969696 |
| _version_ | 1797638738472337408 |
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| author | Chunjiao Gu Qiang Zhang Deng Zhang Yancheng Zhang Junsong Liang |
| author_facet | Chunjiao Gu Qiang Zhang Deng Zhang Yancheng Zhang Junsong Liang |
| author_sort | Chunjiao Gu |
| collection | DOAJ |
| description | Callicarpa integerrima var. chinensis is one of the traditional medical herbs which has the potential for multiple diseases’ treatment. In this study, the complete chloroplast genome sequence of C. integerrima var. chinensis was sequenced and assembled. A typical quadripartite structure was observed in the chloroplast genome of C. integerrima var. chinensis which was 154179 bp in length, including a pair of inverted repeat (IR) regions (each 51396 bp) separated by a large single-copy region (LSC) of 84927 bp and a small single-copy region (SSC) of 17856 bp, and the overall GC contents of the chloroplast genome was 38.08%. Additionally, we annotated 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis was adopted which confirmed the position of C. integerrima var. chinensis was close to the congeneric C. formosana and C. siongsaiensis. |
| first_indexed | 2024-03-11T13:07:51Z |
| format | Article |
| id | doaj.art-c20e36ae1f28439c9fa1e9b6b907250e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:51Z |
| publishDate | 2021-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-c20e36ae1f28439c9fa1e9b6b907250e2023-11-03T14:28:30ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-09-01692779278010.1080/23802359.2021.19696961969696The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plantChunjiao Gu0Qiang Zhang1Deng Zhang2Yancheng Zhang3Junsong Liang4College of Pharmacy, Guilin Medical UniversityCollege of Pharmacy, Guilin Medical UniversityGuangxi Institute of Botany, The Chinese Academy of SciencesCollege of Pharmacy, Guilin Medical UniversityCollege of Pharmacy, Guilin Medical UniversityCallicarpa integerrima var. chinensis is one of the traditional medical herbs which has the potential for multiple diseases’ treatment. In this study, the complete chloroplast genome sequence of C. integerrima var. chinensis was sequenced and assembled. A typical quadripartite structure was observed in the chloroplast genome of C. integerrima var. chinensis which was 154179 bp in length, including a pair of inverted repeat (IR) regions (each 51396 bp) separated by a large single-copy region (LSC) of 84927 bp and a small single-copy region (SSC) of 17856 bp, and the overall GC contents of the chloroplast genome was 38.08%. Additionally, we annotated 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis was adopted which confirmed the position of C. integerrima var. chinensis was close to the congeneric C. formosana and C. siongsaiensis.http://dx.doi.org/10.1080/23802359.2021.1969696callicarpa integerrima var. chinensischloroplast genomephylogenetic relationship |
| spellingShingle | Chunjiao Gu Qiang Zhang Deng Zhang Yancheng Zhang Junsong Liang The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant Mitochondrial DNA. Part B. Resources callicarpa integerrima var. chinensis chloroplast genome phylogenetic relationship |
| title | The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant |
| title_full | The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant |
| title_fullStr | The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant |
| title_full_unstemmed | The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant |
| title_short | The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant |
| title_sort | complete chloroplast genome of callicarpa integerrima var chinensis lamiaceae from guilin china a potential medicinal plant |
| topic | callicarpa integerrima var. chinensis chloroplast genome phylogenetic relationship |
| url | http://dx.doi.org/10.1080/23802359.2021.1969696 |
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