High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria
Enterobacter sp. strain Bisph2 was isolated from a sandy soil from Biskra, Algeria and exhibits glyphosate-degrading activity. Multilocus sequence analysis of the 16S rRNA, rpoB, hsp60, gyrB and dnaJ genes demonstrated that Bisph2 might be a member of a new species of the genus Enterobacter. Genomic...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Elsevier
2016-06-01
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| Series: | Genomics Data |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2213596016300411 |
| _version_ | 1818524759833444352 |
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| author | Ouided Benslama Abderrahmane Boulahrouf |
| author_facet | Ouided Benslama Abderrahmane Boulahrouf |
| author_sort | Ouided Benslama |
| collection | DOAJ |
| description | Enterobacter sp. strain Bisph2 was isolated from a sandy soil from Biskra, Algeria and exhibits glyphosate-degrading activity. Multilocus sequence analysis of the 16S rRNA, rpoB, hsp60, gyrB and dnaJ genes demonstrated that Bisph2 might be a member of a new species of the genus Enterobacter. Genomic sequencing of Bisph2 was used to better clarify the relationships among Enterobacter species. Annotation and analysis of the genome sequence showed that the 5.535.656 bp genome of Enterobacter sp. Bisph2 consists in one chromosome and no detectable plasmid, has a 53.19% GC content and 78% of genes were assigned a putative function. The genome contains four prophages of which 3 regions are intact and no CRISPER was detected. The nucleotide sequence of this genome was deposited into DDBJ/EMBL/GenBank under the accession JXAF00000000. |
| first_indexed | 2024-12-11T06:01:05Z |
| format | Article |
| id | doaj.art-c22c0b76c97248a393e6fa24fe7340fb |
| institution | Directory Open Access Journal |
| issn | 2213-5960 |
| language | English |
| last_indexed | 2024-12-11T06:01:05Z |
| publishDate | 2016-06-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Genomics Data |
| spelling | doaj.art-c22c0b76c97248a393e6fa24fe7340fb2022-12-22T01:18:29ZengElsevierGenomics Data2213-59602016-06-018C616610.1016/j.gdata.2016.03.005High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, AlgeriaOuided BenslamaAbderrahmane BoulahroufEnterobacter sp. strain Bisph2 was isolated from a sandy soil from Biskra, Algeria and exhibits glyphosate-degrading activity. Multilocus sequence analysis of the 16S rRNA, rpoB, hsp60, gyrB and dnaJ genes demonstrated that Bisph2 might be a member of a new species of the genus Enterobacter. Genomic sequencing of Bisph2 was used to better clarify the relationships among Enterobacter species. Annotation and analysis of the genome sequence showed that the 5.535.656 bp genome of Enterobacter sp. Bisph2 consists in one chromosome and no detectable plasmid, has a 53.19% GC content and 78% of genes were assigned a putative function. The genome contains four prophages of which 3 regions are intact and no CRISPER was detected. The nucleotide sequence of this genome was deposited into DDBJ/EMBL/GenBank under the accession JXAF00000000.http://www.sciencedirect.com/science/article/pii/S2213596016300411Enterobacter sp. Bisph2GlyphosateMultilocus sequence analysisGenome analysis |
| spellingShingle | Ouided Benslama Abderrahmane Boulahrouf High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria Genomics Data Enterobacter sp. Bisph2 Glyphosate Multilocus sequence analysis Genome analysis |
| title | High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria |
| title_full | High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria |
| title_fullStr | High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria |
| title_full_unstemmed | High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria |
| title_short | High-quality draft genome sequence of Enterobacter sp. Bisph2, a glyphosate-degrading bacterium isolated from a sandy soil of Biskra, Algeria |
| title_sort | high quality draft genome sequence of enterobacter sp bisph2 a glyphosate degrading bacterium isolated from a sandy soil of biskra algeria |
| topic | Enterobacter sp. Bisph2 Glyphosate Multilocus sequence analysis Genome analysis |
| url | http://www.sciencedirect.com/science/article/pii/S2213596016300411 |
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