In the right place, at the right time: the integration of bacteria into the Plankton Ecology Group model

In the right place, at the right time: the integration of bacteria into the Plankton Ecology Group model

Abstract Background Planktonic microbial communities have critical impacts on the pelagic food web and water quality status in freshwater ecosystems, yet no general model of bacterial community assembly linked to higher trophic levels and hydrodynamics has been assessed. In this study, we utilized a...

Descripció completa

Dades bibliogràfiques
Autors principals:	Hongjae Park, Tanja Shabarova, Michaela M. Salcher, Lenka Kosová, Pavel Rychtecký, Indranil Mukherjee, Karel Šimek, Petr Porcal, Jaromír Seďa, Petr Znachor, Vojtěch Kasalický
Format:	Article
Idioma:	English
Publicat:	BMC 2023-05-01
Col·lecció:	Microbiome
Matèries:	Freshwater reservoirs Microbial communities Spatiotemporal dynamics Microdiversity PEG model
Accés en línia:	https://doi.org/10.1186/s40168-023-01522-0

Ítems similars

Integrating depth-dependent protist dynamics and microbial interactions in spring succession of a freshwater reservoir
per: Indranil Mukherjee, et al.
Publicat: (2024-05-01)

Long-Read-Resolved, Ecosystem-Wide Exploration of Nucleotide and Structural Microdiversity of Lake Bacterioplankton Genomes
per: Yusuke Okazaki, et al.
Publicat: (2022-08-01)

Microdiversity and phylogeographic diversification of bacterioplankton in pelagic freshwater systems revealed through long-read amplicon sequencing
per: Yusuke Okazaki, et al.
Publicat: (2021-01-01)

High-resolution metagenomic reconstruction of the freshwater spring bloom
per: Vinicius S. Kavagutti, et al.
Publicat: (2023-01-01)

Hidden in plain sight—highly abundant and diverse planktonic freshwater Chloroflexi
per: Maliheh Mehrshad, et al.
Publicat: (2018-10-01)

Uncovering the genomic basis of symbiotic interactions and niche adaptations in freshwater picocyanobacteria
per: Hongjae Park, et al.
Publicat: (2024-08-01)

Genome-resolved year-round dynamics reveal a broad range of giant virus microdiversity
per: Yue Fang, et al.
Publicat: (2025-01-01)

The mosquito microbiome includes habitat-specific but rare symbionts
per: Hans Schrieke, et al.
Publicat: (2022-01-01)

Bacterial and Eukaryotic Small-Subunit Amplicon Data Do Not Provide a Quantitative Picture of Microbial Communities, but They Are Reliable in the Context of Ecological Interpretations
per: Kasia Piwosz, et al.
Publicat: (2020-04-01)

Metagenome-assembled microbial genomes from Parkinson’s disease fecal samples
per: Ilhan Cem Duru, et al.
Publicat: (2024-08-01)

Synchrony of Eukaryotic and Prokaryotic Planktonic Communities in Three Seasonally Sampled Austrian Lakes
per: Christina Bock, et al.
Publicat: (2018-06-01)

Same same but different: ecological niche partitioning of planktonic freshwater prokaryotes
per: Michaela M. Salcher
Publicat: (2013-08-01)

Trends of Microdiversity Reveal Depth-Dependent Evolutionary Strategies of Viruses in the Mediterranean
per: Felipe Hernandes Coutinho, et al.
Publicat: (2019-12-01)

Trends of Microdiversity Reveal Depth-Dependent Evolutionary Strategies of Viruses in the Mediterranean
per: Felipe Hernandes Coutinho, et al.
Publicat: (2019-12-01)

Relationship of Bacterial Microdiversity of Rhizosphere and Bulk Soil with Soil Organic Carbon Mineralization in Maize Fields
per: Xianheng Fu, et al.
Publicat: (2023-02-01)

Coastal Transient Niches Shape the Microdiversity Pattern of a Bacterioplankton Population with Reduced Genomes
per: Xiao Chu, et al.
Publicat: (2022-08-01)

Microdiversity of Enterococcus faecalis isolates in cases of infective endocarditis: selection of non-synonymous mutations and large deletions is associated with phenotypic modifications
per: G. Royer, et al.
Publicat: (2021-01-01)

Seawater temperature drives the diversity of key cyanobacteria (Synechococcus and Prochlorococcus) in a warming sea
per: Alexandra Coello-Camba, et al.
Publicat: (2024-09-01)

Ecological filtering and phylogeographic structuring of Psychrilyobacter within two closely related limpet species from the Southern Ocean
per: Guillaume Schwob, et al.
Publicat: (2024-01-01)

Viral metagenomics reveals diverse virus-host interactions throughout the soil depth profile
per: George Muscatt, et al.
Publicat: (2023-12-01)

Draft genomes of three closely related low light-adapted Prochlorococcus
per: Jessie W. Berta-Thompson, et al.
Publicat: (2023-02-01)

Bacterial community of sediments under the Eastern Boundary Current System shows high microdiversity and a latitudinal spatial pattern
per: Alexis Fonseca, et al.
Publicat: (2022-09-01)

Pseudo-nitzschia challenged with co-occurring viral communities display diverse infection phenotypes
per: Michael Curtis Grier Carlson, et al.
Publicat: (2016-04-01)

Level crossing rate of macrodiversity with three microdiversity SC receivers over gamma shadowed Nakagami-m channel
per: Petković Goran, et al.
Publicat: (2016-01-01)

Repeated flood disturbance enhances rotifer dominance and diversity in a zooplankton community of a small dammed mountain pond
per: Carmen Gabaldón, et al.
Publicat: (2016-12-01)

Extremely halophilic brine community manipulation shows higher robustness of microbiomes inhabiting human-driven solar saltern than naturally driven lake
per: Raquel Liébana, et al.
Publicat: (2024-07-01)

Puumala Virus Variants Circulating in Forests of Ardennes, France: Ten Years of Genetic Evolution
per: Guillaume Castel, et al.
Publicat: (2021-09-01)

Discovery and Characterization of a New Cold-Active Protease From an Extremophilic Bacterium via Comparative Genome Analysis and in vitro Expression
per: Amedea Perfumo, et al.
Publicat: (2020-05-01)

Differentiated Evolutionary Strategies of Genetic Diversification in Atlantic and Pacific Thaumarchaeal Populations
per: Yunha Hwang, et al.
Publicat: (2022-06-01)

Outage Probability of Macrodiversity Reception in the Presence of Fading and Weibull Co-Channel Interference
per: Miloš Perić, et al.
Publicat: (2018-01-01)

Correction: The Diversity of the Genus, an Important Group of Freshwater Bacterioplankton, by Characterization of 35 Isolated Strains.
per: Vojtěch Kasalický, et al.
Publicat: (2013-01-01)

The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains.
per: Vojtěch Kasalický, et al.
Publicat: (2013-01-01)

Periphytic and planktonic algae records from the upper Paraná river ﬂoodplain, Brazil: an update
per: Bárbara Dunck, et al.
Publicat: (2018-12-01)

The effects of spatial and temporal replicate sampling on eDNA metabarcoding
per: Kevin K. Beentjes, et al.
Publicat: (2019-07-01)

Dynamics and interactions of protists in marine ecosystems
per: Sim, Clarence Wei Hung
Publicat: (2025)

Virioplankton as an important component of plankton in the Volga Reservoirs
per: A. I. Kopylov, et al.
Publicat: (2021-05-01)

Getting the right traits: reproductive and dispersal characteristics predict the invasiveness of herbaceous plant species.
per: Lenka Moravcová, et al.
Publicat: (2015-01-01)

Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by Reverse Line Blot Hybridization.
per: Jan Jezbera, et al.
Publicat: (2013-01-01)

Performance of Diversity System Output Signal in Mobile Cellular System in the Presence of α-μ Short Term Fading and Gamma Long Term Fading
per: D. Krstic, et al.
Publicat: (2016-12-01)

CARD-FISH in the Sequencing Era: Opening a New Universe of Protistan Ecology
per: Kasia Piwosz, et al.
Publicat: (2021-03-01)