OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors
Dinoflagellates are important primary producers known to form Harmful Algae Blooms (HABs). In water, nutrient availability, pH, salinity and anthropogenic contamination constitute chemical stressors for them. The emergence of OMICs approaches propelled our understanding of dinoflagellates’ responses...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
MDPI AG
2023-09-01
|
| Series: | Biology |
| Subjects: | |
| Online Access: | https://www.mdpi.com/2079-7737/12/9/1234 |
| _version_ | 1827727102494900224 |
|---|---|
| author | Alice Roussel Vincent Mériot Thierry Jauffrais Véronique Berteaux-Lecellier Nicolas Lebouvier |
| author_facet | Alice Roussel Vincent Mériot Thierry Jauffrais Véronique Berteaux-Lecellier Nicolas Lebouvier |
| author_sort | Alice Roussel |
| collection | DOAJ |
| description | Dinoflagellates are important primary producers known to form Harmful Algae Blooms (HABs). In water, nutrient availability, pH, salinity and anthropogenic contamination constitute chemical stressors for them. The emergence of OMICs approaches propelled our understanding of dinoflagellates’ responses to stressors. However, in dinoflagellates, these approaches are still biased, as transcriptomic approaches are largely conducted compared to proteomic and metabolomic approaches. Furthermore, integrated OMICs approaches are just emerging. Here, we report recent contributions of the different OMICs approaches to the investigation of dinoflagellates’ responses to chemical stressors and discuss the current challenges we need to face to push studies further despite the lack of genomic resources available for dinoflagellates. |
| first_indexed | 2024-03-10T23:01:48Z |
| format | Article |
| id | doaj.art-c29b8be869254ffc8a08630cb1562531 |
| institution | Directory Open Access Journal |
| issn | 2079-7737 |
| language | English |
| last_indexed | 2024-03-10T23:01:48Z |
| publishDate | 2023-09-01 |
| publisher | MDPI AG |
| record_format | Article |
| series | Biology |
| spelling | doaj.art-c29b8be869254ffc8a08630cb15625312023-11-19T09:38:54ZengMDPI AGBiology2079-77372023-09-01129123410.3390/biology12091234OMICS Approaches to Assess Dinoflagellate Responses to Chemical StressorsAlice Roussel0Vincent Mériot1Thierry Jauffrais2Véronique Berteaux-Lecellier3Nicolas Lebouvier4ISEA, EA7484, Campus de Nouville, Université de la Nouvelle Calédonie, Noumea 98851, New CaledoniaISEA, EA7484, Campus de Nouville, Université de la Nouvelle Calédonie, Noumea 98851, New CaledoniaIfremer, IRD, CNRS, Univ. de la Réunion, Univ. de la Nouvelle Calédonie, UMR 9220 ENTROPIE, 101 Promenade Roger Laroque, Noumea 98897, New CaledoniaCNRS, Ifremer, IRD, Univ. de la Réunion, Univ. de la Nouvelle Calédonie, UMR 9220 ENTROPIE, 101 Promenade Roger Laroque, Noumea 98897, New CaledoniaISEA, EA7484, Campus de Nouville, Université de la Nouvelle Calédonie, Noumea 98851, New CaledoniaDinoflagellates are important primary producers known to form Harmful Algae Blooms (HABs). In water, nutrient availability, pH, salinity and anthropogenic contamination constitute chemical stressors for them. The emergence of OMICs approaches propelled our understanding of dinoflagellates’ responses to stressors. However, in dinoflagellates, these approaches are still biased, as transcriptomic approaches are largely conducted compared to proteomic and metabolomic approaches. Furthermore, integrated OMICs approaches are just emerging. Here, we report recent contributions of the different OMICs approaches to the investigation of dinoflagellates’ responses to chemical stressors and discuss the current challenges we need to face to push studies further despite the lack of genomic resources available for dinoflagellates.https://www.mdpi.com/2079-7737/12/9/1234dinoflagellatesmicroalgaephytoplanktonprotistOMICstranscriptomic |
| spellingShingle | Alice Roussel Vincent Mériot Thierry Jauffrais Véronique Berteaux-Lecellier Nicolas Lebouvier OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors Biology dinoflagellates microalgae phytoplankton protist OMICs transcriptomic |
| title | OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors |
| title_full | OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors |
| title_fullStr | OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors |
| title_full_unstemmed | OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors |
| title_short | OMICS Approaches to Assess Dinoflagellate Responses to Chemical Stressors |
| title_sort | omics approaches to assess dinoflagellate responses to chemical stressors |
| topic | dinoflagellates microalgae phytoplankton protist OMICs transcriptomic |
| url | https://www.mdpi.com/2079-7737/12/9/1234 |
| work_keys_str_mv | AT aliceroussel omicsapproachestoassessdinoflagellateresponsestochemicalstressors AT vincentmeriot omicsapproachestoassessdinoflagellateresponsestochemicalstressors AT thierryjauffrais omicsapproachestoassessdinoflagellateresponsestochemicalstressors AT veroniqueberteauxlecellier omicsapproachestoassessdinoflagellateresponsestochemicalstressors AT nicolaslebouvier omicsapproachestoassessdinoflagellateresponsestochemicalstressors |