First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
This article reports the analyses of the rhizospheric microbiome of the terrestrial mangrove Ceriops tagal (Perr.) C.B.Rob. from the Indian Sundarbans. Samples were collected using standard protocols and 16S rRNA gene V3–V4 region amplicon sequencing was performed to identify the bacterial communiti...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2022-08-01
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| Series: | Data in Brief |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S235234092200662X |
| _version_ | 1798042886338510848 |
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| author | Gaurab Aditya Dhar Sayak Ganguli Bidisha Mallick |
| author_facet | Gaurab Aditya Dhar Sayak Ganguli Bidisha Mallick |
| author_sort | Gaurab Aditya Dhar |
| collection | DOAJ |
| description | This article reports the analyses of the rhizospheric microbiome of the terrestrial mangrove Ceriops tagal (Perr.) C.B.Rob. from the Indian Sundarbans. Samples were collected using standard protocols and 16S rRNA gene V3–V4 region amplicon sequencing was performed to identify the bacterial communities prevalent in the rhizosphere. A total of 1,74,324 quality checked reads were assembled into contigs and were analyzed using QIIME2 and MetaG server to reveal the abundance of Proteobacteria, Bacteroidetes and Actinobacteria. The data is available at the NCBI - Sequence Read Archive with accession number: SRR15652592. This is the first report of the rhizospheric microbiome belonging to this plant from the Indian Sundarbans. |
| first_indexed | 2024-04-11T22:41:44Z |
| format | Article |
| id | doaj.art-c3706904281d4133881ddb0943c800e0 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-04-11T22:41:44Z |
| publishDate | 2022-08-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-c3706904281d4133881ddb0943c800e02022-12-22T03:58:57ZengElsevierData in Brief2352-34092022-08-0143108468First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian SundarbansGaurab Aditya Dhar0Sayak Ganguli1Bidisha Mallick2Post Graduate Department of Botany, Lady Brabourne College, Kolkata, IndiaPost Graduate Department of Biotechnology, St. Xavier's College (Autonomous), Kolkata, 700016, India; Corresponding authors.Post Graduate Department of Botany, Lady Brabourne College, Kolkata, India; Corresponding authors.This article reports the analyses of the rhizospheric microbiome of the terrestrial mangrove Ceriops tagal (Perr.) C.B.Rob. from the Indian Sundarbans. Samples were collected using standard protocols and 16S rRNA gene V3–V4 region amplicon sequencing was performed to identify the bacterial communities prevalent in the rhizosphere. A total of 1,74,324 quality checked reads were assembled into contigs and were analyzed using QIIME2 and MetaG server to reveal the abundance of Proteobacteria, Bacteroidetes and Actinobacteria. The data is available at the NCBI - Sequence Read Archive with accession number: SRR15652592. This is the first report of the rhizospheric microbiome belonging to this plant from the Indian Sundarbans.http://www.sciencedirect.com/science/article/pii/S235234092200662XRhizosphereBacterial abundanceIllumina sequencingIndian Sundarbans |
| spellingShingle | Gaurab Aditya Dhar Sayak Ganguli Bidisha Mallick First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans Data in Brief Rhizosphere Bacterial abundance Illumina sequencing Indian Sundarbans |
| title | First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans |
| title_full | First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans |
| title_fullStr | First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans |
| title_full_unstemmed | First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans |
| title_short | First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans |
| title_sort | first insights into the rhizospheric bacterial abundance data of ceriops tagal perr c b rob from indian sundarbans |
| topic | Rhizosphere Bacterial abundance Illumina sequencing Indian Sundarbans |
| url | http://www.sciencedirect.com/science/article/pii/S235234092200662X |
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