Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China
Euphorbia hainanensis is a rare cliff top boskage, which has an important ecological and economic value. In this study, we sequenced its complete chloroplast (cp) genome using Illumina sequencing platform. The cp genome of E. hainanensis is a typical quadripartite structure with a length of 163,977 ...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1596761 |
| _version_ | 1797639879086047232 |
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| author | Jun-Feng Zhang Li- Zhao Na Duan Hong-Xia Guo Chuang-Yun Wang Bing-Bing Liu |
| author_facet | Jun-Feng Zhang Li- Zhao Na Duan Hong-Xia Guo Chuang-Yun Wang Bing-Bing Liu |
| author_sort | Jun-Feng Zhang |
| collection | DOAJ |
| description | Euphorbia hainanensis is a rare cliff top boskage, which has an important ecological and economic value. In this study, we sequenced its complete chloroplast (cp) genome using Illumina sequencing platform. The cp genome of E. hainanensis is a typical quadripartite structure with a length of 163,977 bp, which contained inverted repeats (IR) of 26,717 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 92,771 bp and 17,772 bp, respectively. A total of 131 genes, 82 of which are protein coding genes, 39 tRNA genes, and eight rRNA genes were identified. The overall GC content of the plastome is 35.4% while the corresponding values of the LSC, SSC, and IR regions are 32.4%, 30.0%, and 42.4%, respectively. The phylogenetic analysis suggested that E. hainanensis was closely related to the species of E. esula. |
| first_indexed | 2024-03-11T13:23:54Z |
| format | Article |
| id | doaj.art-c436d34ad0bb42b4830ee8cc7c6edd22 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:23:54Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-c436d34ad0bb42b4830ee8cc7c6edd222023-11-03T10:06:43ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411325132610.1080/23802359.2019.15967611596761Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to ChinaJun-Feng Zhang0Li- Zhao1Na Duan2Hong-Xia Guo3Chuang-Yun Wang4Bing-Bing Liu5Shanxi UniversityShanxi Academy of Agricultural SciencesShanxi UniversityShanxi Academy of Agricultural SciencesShanxi Academy of Agricultural SciencesShanxi UniversityEuphorbia hainanensis is a rare cliff top boskage, which has an important ecological and economic value. In this study, we sequenced its complete chloroplast (cp) genome using Illumina sequencing platform. The cp genome of E. hainanensis is a typical quadripartite structure with a length of 163,977 bp, which contained inverted repeats (IR) of 26,717 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 92,771 bp and 17,772 bp, respectively. A total of 131 genes, 82 of which are protein coding genes, 39 tRNA genes, and eight rRNA genes were identified. The overall GC content of the plastome is 35.4% while the corresponding values of the LSC, SSC, and IR regions are 32.4%, 30.0%, and 42.4%, respectively. The phylogenetic analysis suggested that E. hainanensis was closely related to the species of E. esula.http://dx.doi.org/10.1080/23802359.2019.1596761euphorbia hainanensischloroplast genomephylogenetic analysis |
| spellingShingle | Jun-Feng Zhang Li- Zhao Na Duan Hong-Xia Guo Chuang-Yun Wang Bing-Bing Liu Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China Mitochondrial DNA. Part B. Resources euphorbia hainanensis chloroplast genome phylogenetic analysis |
| title | Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China |
| title_full | Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China |
| title_fullStr | Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China |
| title_full_unstemmed | Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China |
| title_short | Complete chloroplast genome of Euphorbia hainanensis (Euphorbiaceae), a rare cliff top boskage endemic to China |
| title_sort | complete chloroplast genome of euphorbia hainanensis euphorbiaceae a rare cliff top boskage endemic to china |
| topic | euphorbia hainanensis chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1596761 |
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