Sandwich-Type DNA Micro-Optode Based on Gold–Latex Spheres Label for Reflectance Dengue Virus Detection

A DNA micro-optode for dengue virus detection was developed based on the sandwich hybridization strategy of DNAs on succinimide-functionalized poly(<i>n</i>-butyl acrylate) (poly(<i>n</i>BA-NAS)) microspheres. Gold nanoparticles (AuNPs) with an average diameter of ~20 nm were...

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Main Authors: Jeningsih, Ling Ling Tan, Alizar Ulianas, Lee Yook Heng, Nur-Fadhilah Mazlan, Nur Diyana Jamaluddin, Nurul Yuziana Mohd. Yusof, Bahariah Khalid, Goh Choo Ta
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:Sensors
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Online Access:https://www.mdpi.com/1424-8220/20/7/1820
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Summary:A DNA micro-optode for dengue virus detection was developed based on the sandwich hybridization strategy of DNAs on succinimide-functionalized poly(<i>n</i>-butyl acrylate) (poly(<i>n</i>BA-NAS)) microspheres. Gold nanoparticles (AuNPs) with an average diameter of ~20 nm were synthesized using a centrifugation-based method and adsorbed on the submicrometer-sized polyelectrolyte-coated poly(styrene-<i>co</i>-acrylic acid) (PSA) latex particles via an electrostatic method. The AuNP&#8722;latex spheres were attached to the thiolated reporter probe (rDNA) by Au&#8722;thiol binding to functionalize as an optical gold&#8722;latex&#8722;rDNA label. The one-step sandwich hybridization recognition involved a pair of a DNA probe, i.e., capture probe (pDNA), and AuNP&#8722;PSA reporter label that flanked the target DNA (complementary DNA (cDNA)). The concentration of dengue virus cDNA was optically transduced by immobilized AuNP&#8722;PSA&#8722;rDNA conjugates as the DNA micro-optode exhibited a violet hue upon the DNA sandwich hybridization reaction, which could be monitored by a fiber-optic reflectance spectrophotometer at 637 nm. The optical genosensor showed a linear reflectance response over a wide cDNA concentration range from 1.0 &#215; 10<sup>&#8722;21</sup> M to 1.0 &#215; 10<sup>&#8722;12</sup> M cDNA (<i>R<sup>2 </sup></i>= 0.9807) with a limit of detection (LOD) of 1 &#215; 10<sup>&#8722;29</sup> M. The DNA biosensor was reusable for three consecutive applications after regeneration with mild sodium hydroxide. The sandwich-type optical biosensor was well validated with a molecular reverse transcription polymerase chain reaction (RT-PCR) technique for screening of dengue virus in clinical samples, e.g., serum, urine, and saliva from dengue virus-infected patients under informed consent.
ISSN:1424-8220