The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China
Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long a...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-06-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2086081 |
| _version_ | 1797638599128121344 |
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| author | Fangyuan Guan Qiang Sheng Yixiang Zhang He Lv Yingying Wang |
| author_facet | Fangyuan Guan Qiang Sheng Yixiang Zhang He Lv Yingying Wang |
| author_sort | Fangyuan Guan |
| collection | DOAJ |
| description | Coreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long and it consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and a control region (D-loop). Phylogenetic analysis using the maximum-likelihood method, based on 13 PCGs and two rRNA from 13 species produced three major clades. The phylogenetic tree showed that C. liui is most closely related to Coreoperca whiteheadi. Our results provide useful information for understanding the phylogeny of the genus Coreoperca, as well as for conducing conservation studies of Sinipercidae and related species. |
| first_indexed | 2024-03-11T13:05:51Z |
| format | Article |
| id | doaj.art-c46be9d8b7fe4ad5b03ccc10c28317da |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:51Z |
| publishDate | 2022-06-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-c46be9d8b7fe4ad5b03ccc10c28317da2023-11-03T14:36:04ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-06-01761075107710.1080/23802359.2022.20860812086081The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in ChinaFangyuan Guan0Qiang Sheng1Yixiang Zhang2He Lv3Yingying Wang4College of Life Sciences, Zhejiang Province Key Laboratory of Aquatic Resources Conservation and Development, Huzhou UniversityCollege of Life Sciences, Zhejiang Province Key Laboratory of Aquatic Resources Conservation and Development, Huzhou UniversityCollege of Life Sciences, Zhejiang Province Key Laboratory of Aquatic Resources Conservation and Development, Huzhou UniversityCollege of Life Sciences, Zhejiang Province Key Laboratory of Aquatic Resources Conservation and Development, Huzhou UniversityNational Wetland Museum of ChinaCoreoperca liui as an approximate species of the genus Siniperca, provides an important source for the genetic diversity of the mandarin fish, which is valuable for the protection of biodiversity and utilization of germplasm resources. The complete mitochondrial genome of C. liui is 16,482 bp long and it consists of 13 protein-coding genes (PCGs), two ribosomal RNA genes, 22 transfer RNA genes, and a control region (D-loop). Phylogenetic analysis using the maximum-likelihood method, based on 13 PCGs and two rRNA from 13 species produced three major clades. The phylogenetic tree showed that C. liui is most closely related to Coreoperca whiteheadi. Our results provide useful information for understanding the phylogeny of the genus Coreoperca, as well as for conducing conservation studies of Sinipercidae and related species.http://dx.doi.org/10.1080/23802359.2022.2086081coreoperca liuisinipercidaecomplete mitochondrial genomefreshwater fishphylogenetic analysis |
| spellingShingle | Fangyuan Guan Qiang Sheng Yixiang Zhang He Lv Yingying Wang The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China Mitochondrial DNA. Part B. Resources coreoperca liui sinipercidae complete mitochondrial genome freshwater fish phylogenetic analysis |
| title | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
| title_full | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
| title_fullStr | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
| title_full_unstemmed | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
| title_short | The complete mitochondrial genome of a vulnerable mandarin fish Coreoperca liui (Teleostei: Perciformes: Serranidae) from Qiandaohu Lake in China |
| title_sort | complete mitochondrial genome of a vulnerable mandarin fish coreoperca liui teleostei perciformes serranidae from qiandaohu lake in china |
| topic | coreoperca liui sinipercidae complete mitochondrial genome freshwater fish phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2086081 |
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