Phylogenetic and Expression Analysis of the Sucrose Synthase and Sucrose Phosphate Synthase Gene Family in Potatoes

Sucrose synthase (SUS) and sucrose phosphate synthase (SPS) are essential in plant sucrose metabolism. The potato is an important crop worldwide, but systematic analyses of the <i>StSUS</i> and <i>StSPS</i> gene families in potatoes are still lacking. Ten sucrose metabolism-r...

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Bibliographic Details
Main Authors: Jun Hu, Yanfeng Duan, Jinxue Hu, Shuqing Zhang, Guangcun Li
Format: Article
Language:English
Published: MDPI AG 2024-01-01
Series:Metabolites
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Online Access:https://www.mdpi.com/2218-1989/14/1/70
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Summary:Sucrose synthase (SUS) and sucrose phosphate synthase (SPS) are essential in plant sucrose metabolism. The potato is an important crop worldwide, but systematic analyses of the <i>StSUS</i> and <i>StSPS</i> gene families in potatoes are still lacking. Ten sucrose metabolism-related genes were identified in this study. The <i>SUSs</i> and <i>SPSs</i> could each be split into three subgroups through phylogenetic analysis. <i>StSUSIc</i> was the most highly expressed gene in different developmental tissues. Ka/Ks analysis showed that <i>StSUSIb</i> and <i>StSUSIc</i> were subjected to more-significant homozygous selection pressure. Our cis-acting element analysis of the <i>StSUS</i> and <i>StSPS</i> promoter sequences showed four elements: defense- and stress-responsive, hormone-responsive, light-responsive, and transcription factor elements. The expression of <i>StSUS</i> and <i>StSPS</i> genes was found to be regulated by circadian rhythm. In the treatments of 1% to 5% sucrose, glucose, and fructose, the expression of <i>StSUS</i> and <i>StSPS</i> family genes was enhanced by sucrose, but inhibited at high-glucose and fructose concentrations. This study identified six <i>StSUS</i> and four <i>StSPS</i> genes and analyzed their gene structure, conserved motifs, chromosome position, promoter elements, phylogenetic tree, and tissue-specific expression patterns. Our results will motivate more research into the biological process underlying the genes of sucrose metabolism in potatoes.
ISSN:2218-1989