The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern
It is the first report on complete chloroplast genome of Alsophila costularis, a least concerned relict tree fern. The genome size is 156,675 bp, with the typical quadripartite structure containing a pair of inverted repeats (IRs) of 24,356 bp separated by a large single-copy (LSC) region and a smal...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1614888 |
| _version_ | 1797639811986620416 |
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| author | Ting Wang Ziqing He Zhen Wang Xinyao Sun Yingjuan Su |
| author_facet | Ting Wang Ziqing He Zhen Wang Xinyao Sun Yingjuan Su |
| author_sort | Ting Wang |
| collection | DOAJ |
| description | It is the first report on complete chloroplast genome of Alsophila costularis, a least concerned relict tree fern. The genome size is 156,675 bp, with the typical quadripartite structure containing a pair of inverted repeats (IRs) of 24,356 bp separated by a large single-copy (LSC) region and a small single-copy (SSC) region of 86,338 bp and 21,625 bp, respectively. A total of 133 genes are predicted, including 89 protein-coding genes, eight ribosomal RNA genes, 33 tRNA genes, and three pseudogenes. The ML phylogenetic tree revealed A. costularisis as sister to Alsophila spinulosa. |
| first_indexed | 2024-03-11T13:22:46Z |
| format | Article |
| id | doaj.art-c51f6355beed4b158227e147b65973e6 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:22:46Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-c51f6355beed4b158227e147b65973e62023-11-03T10:06:46ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411897189810.1080/23802359.2019.16148881614888The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fernTing Wang0Ziqing He1Zhen Wang2Xinyao Sun3Yingjuan Su4South China Agricultural UniversitySun Yat-sen UniversitySun Yat-sen UniversitySun Yat-sen UniversitySun Yat-sen UniversityIt is the first report on complete chloroplast genome of Alsophila costularis, a least concerned relict tree fern. The genome size is 156,675 bp, with the typical quadripartite structure containing a pair of inverted repeats (IRs) of 24,356 bp separated by a large single-copy (LSC) region and a small single-copy (SSC) region of 86,338 bp and 21,625 bp, respectively. A total of 133 genes are predicted, including 89 protein-coding genes, eight ribosomal RNA genes, 33 tRNA genes, and three pseudogenes. The ML phylogenetic tree revealed A. costularisis as sister to Alsophila spinulosa.http://dx.doi.org/10.1080/23802359.2019.1614888alsophila costularisa least concerned relict tree fernchloroplast genomephylogeny |
| spellingShingle | Ting Wang Ziqing He Zhen Wang Xinyao Sun Yingjuan Su The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern Mitochondrial DNA. Part B. Resources alsophila costularis a least concerned relict tree fern chloroplast genome phylogeny |
| title | The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern |
| title_full | The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern |
| title_fullStr | The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern |
| title_full_unstemmed | The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern |
| title_short | The first complete chloroplast genome of Alsophila costularis (Cyatheaceae), a least concerned relict tree fern |
| title_sort | first complete chloroplast genome of alsophila costularis cyatheaceae a least concerned relict tree fern |
| topic | alsophila costularis a least concerned relict tree fern chloroplast genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2019.1614888 |
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