Non-intrusive high throughput automated data collection from the home cage

Automated home cage monitoring represents a key technology to collect animal activity information directly from the home cage. The availability of 24/7 cage data enables extensive and quantitative assessment of mouse behavior and activity over long periods of time than possible otherwise. When home...

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Main Author: Fabio Iannello
Format: Article
Language:English
Published: Elsevier 2019-04-01
Series:Heliyon
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S240584401838472X
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author Fabio Iannello
author_facet Fabio Iannello
author_sort Fabio Iannello
collection DOAJ
description Automated home cage monitoring represents a key technology to collect animal activity information directly from the home cage. The availability of 24/7 cage data enables extensive and quantitative assessment of mouse behavior and activity over long periods of time than possible otherwise. When home cage monitoring is performed directly at the home cage rack, it is possible to leverage additional advantages, including, e.g., partial (or total) reduction of animal handling, no need for setting up external data collection system as well as not requiring dedicated labs and personnel to perform tests. In this work we introduce a home cage-home rack monitoring system that is capable of continuously detecting spontaneous animal activity occurring in the home cage directly from the home cage rack. The proposed system is based on an electrical capacitance sensing technology that enables non-intrusive and continuous home cage monitoring. We then present a few animal activity metrics that are validated via comparison against a video camera-based tracking system. The results show that the proposed home-cage monitoring system can provide animal activity metrics that are comparable to the ones derived via a conventional video tracking system, with the advantage of system scalability, limited amount of both data generated and computational capabilities required to derive metrics.
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spelling doaj.art-c58d048d9dcb4cda82176947ed37b5a82022-12-22T03:04:32ZengElsevierHeliyon2405-84402019-04-0154e01454Non-intrusive high throughput automated data collection from the home cageFabio Iannello0Corresponding author.; Tecniplast SpA, Via I Maggio, 6, 21020 Buguggiate (VA), ItalyAutomated home cage monitoring represents a key technology to collect animal activity information directly from the home cage. The availability of 24/7 cage data enables extensive and quantitative assessment of mouse behavior and activity over long periods of time than possible otherwise. When home cage monitoring is performed directly at the home cage rack, it is possible to leverage additional advantages, including, e.g., partial (or total) reduction of animal handling, no need for setting up external data collection system as well as not requiring dedicated labs and personnel to perform tests. In this work we introduce a home cage-home rack monitoring system that is capable of continuously detecting spontaneous animal activity occurring in the home cage directly from the home cage rack. The proposed system is based on an electrical capacitance sensing technology that enables non-intrusive and continuous home cage monitoring. We then present a few animal activity metrics that are validated via comparison against a video camera-based tracking system. The results show that the proposed home-cage monitoring system can provide animal activity metrics that are comparable to the ones derived via a conventional video tracking system, with the advantage of system scalability, limited amount of both data generated and computational capabilities required to derive metrics.http://www.sciencedirect.com/science/article/pii/S240584401838472XBioengineeringBioinformaticsCancer researchGeneticsNeurosciencePhysiology
spellingShingle Fabio Iannello
Non-intrusive high throughput automated data collection from the home cage
Heliyon
Bioengineering
Bioinformatics
Cancer research
Genetics
Neuroscience
Physiology
title Non-intrusive high throughput automated data collection from the home cage
title_full Non-intrusive high throughput automated data collection from the home cage
title_fullStr Non-intrusive high throughput automated data collection from the home cage
title_full_unstemmed Non-intrusive high throughput automated data collection from the home cage
title_short Non-intrusive high throughput automated data collection from the home cage
title_sort non intrusive high throughput automated data collection from the home cage
topic Bioengineering
Bioinformatics
Cancer research
Genetics
Neuroscience
Physiology
url http://www.sciencedirect.com/science/article/pii/S240584401838472X
work_keys_str_mv AT fabioiannello nonintrusivehighthroughputautomateddatacollectionfromthehomecage