Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae)
The complete mitochondrial genome of the morotoge shrimp, Pandalopsis japonica was determined by the high-throughput sequencing technique. The mitogenome of P. japonica (15,909 bp) encoded the 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes as well as the non-coding control region (D-Loo...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1553519 |
| _version_ | 1797640556275302400 |
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| author | Tae-Ho Yoon Sapto Andriyono Hye-Eun Kang Nack-keun Kim Soo Rin Lee Hyun-Woo Kim |
| author_facet | Tae-Ho Yoon Sapto Andriyono Hye-Eun Kang Nack-keun Kim Soo Rin Lee Hyun-Woo Kim |
| author_sort | Tae-Ho Yoon |
| collection | DOAJ |
| description | The complete mitochondrial genome of the morotoge shrimp, Pandalopsis japonica was determined by the high-throughput sequencing technique. The mitogenome of P. japonica (15,909 bp) encoded the 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes as well as the non-coding control region (D-Loop). The mitochondrial genome of P. japonica showed an identical gene arrangement in its mitochondrial genome to its relative Pandalid shrimps including P. borealis and P. hypsinotus. Among 13 compared mitogenomes within order Suborder Pleocyemata, P. japonica was most closely related to P. hypsinotus with 86% sequence identity clustering together with three other shrimps in family Pandalidae. |
| first_indexed | 2024-03-11T13:33:50Z |
| format | Article |
| id | doaj.art-c58f188cca95474e90f6c4ce3fc07ac7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:50Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-c58f188cca95474e90f6c4ce3fc07ac72023-11-02T16:07:24ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-014154554610.1080/23802359.2018.15535191553519Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae)Tae-Ho Yoon0Sapto Andriyono1Hye-Eun Kang2Nack-keun Kim3Soo Rin Lee4Hyun-Woo Kim5Pukyong National UniversityPukyong National UniversityPukyong National UniversityPukyong National UniversityPukyong National UniversityPukyong National UniversityThe complete mitochondrial genome of the morotoge shrimp, Pandalopsis japonica was determined by the high-throughput sequencing technique. The mitogenome of P. japonica (15,909 bp) encoded the 13 protein-coding genes (PCGs), 22 tRNA genes, 2 rRNA genes as well as the non-coding control region (D-Loop). The mitochondrial genome of P. japonica showed an identical gene arrangement in its mitochondrial genome to its relative Pandalid shrimps including P. borealis and P. hypsinotus. Among 13 compared mitogenomes within order Suborder Pleocyemata, P. japonica was most closely related to P. hypsinotus with 86% sequence identity clustering together with three other shrimps in family Pandalidae.http://dx.doi.org/10.1080/23802359.2018.1553519high-throughput sequencingpandalidaemitochondrial genomeshrimpeast/japan sea |
| spellingShingle | Tae-Ho Yoon Sapto Andriyono Hye-Eun Kang Nack-keun Kim Soo Rin Lee Hyun-Woo Kim Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae) Mitochondrial DNA. Part B. Resources high-throughput sequencing pandalidae mitochondrial genome shrimp east/japan sea |
| title | Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae) |
| title_full | Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae) |
| title_fullStr | Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae) |
| title_full_unstemmed | Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae) |
| title_short | Molecular characterization of the complete mitochondrial genome of morotoge shrimp Pandalopsis japonica (Decapoda: Pandalidae) |
| title_sort | molecular characterization of the complete mitochondrial genome of morotoge shrimp pandalopsis japonica decapoda pandalidae |
| topic | high-throughput sequencing pandalidae mitochondrial genome shrimp east/japan sea |
| url | http://dx.doi.org/10.1080/23802359.2018.1553519 |
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