De novo species identification using 16S rRNA gene nanopore sequencing

De novo species identification using 16S rRNA gene nanopore sequencing

Nanopore sequencing is rapidly becoming more popular for use in various microbiota-based applications. Major limitations of current approaches are that they do not enable de novo species identification and that they cannot be used to verify species assignments. This severely limits applicability of...

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Bibliographic Details
Main Authors: Inga Leena Angell, Morten Nilsen, Karin C. Lødrup Carlsen, Kai-Håkon Carlsen, Gunilla Hedlin, Christine M. Jonassen, Benjamin Marsland, Björn Nordlund, Eva Maria Rehbinder, Carina Saunders, Håvard Ove Skjerven, Anne Cathrine Staff, Cilla Söderhäll, Riyas Vettukattil, Knut Rudi
Format: Article
Language:English
Published: PeerJ Inc. 2020-10-01
Series:PeerJ
Subjects:
Nanopore
16S rrNA
Infant gut
Microbiota
Online Access:https://peerj.com/articles/10029.pdf

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