Visualizing evolution in real-time method for strain engineering

The adaptive landscape for an industrially-relevant phenotype is determined by the effects of the genetic determinants on the fitness of the microbial system. Identifying the underlying adaptive landscape for a particular phenotype of interest will greatly enhance our abilities to engineer more rob...

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Bibliographic Details
Main Authors: Luis H Reyes, James eWinkler, Katy C. Kao
Format: Article
Language:English
Published: Frontiers Media S.A. 2012-05-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00198/full
Description
Summary:The adaptive landscape for an industrially-relevant phenotype is determined by the effects of the genetic determinants on the fitness of the microbial system. Identifying the underlying adaptive landscape for a particular phenotype of interest will greatly enhance our abilities to engineer more robust microbial strains. Visualizing evolution in real-time (VERT) is a recently developed method based on in vitro adaptive evolution that facilitates the identification of fitter mutants throughout the course of evolution. Combined with high-throughput genomic tools, VERT can greatly enhance the mapping of adaptive landscapes of industrially-relevant phenotypes in microbial systems, thereby expanding our knowledge on the parameters that can be used for strain engineering.
ISSN:1664-302X