Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories

Sample identification error is a severe medical error in clinical molecular diagnostic laboratories, which can lead to reporting the wrong results for the patient involved. Sample contamination can also lead to incorrect test reports. Avoiding sample identification error and sample contamination cou...

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Main Authors: Dahui Qin, Mark Forster, Shital M. Gandhi, Ratilal Akabari, Zhong Zheng, Janella Lal, Katherine Lovinger
Format: Article
Language:English
Published: MDPI AG 2022-11-01
Series:Current Issues in Molecular Biology
Subjects:
Online Access:https://www.mdpi.com/1467-3045/44/11/375
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author Dahui Qin
Mark Forster
Shital M. Gandhi
Ratilal Akabari
Zhong Zheng
Janella Lal
Katherine Lovinger
author_facet Dahui Qin
Mark Forster
Shital M. Gandhi
Ratilal Akabari
Zhong Zheng
Janella Lal
Katherine Lovinger
author_sort Dahui Qin
collection DOAJ
description Sample identification error is a severe medical error in clinical molecular diagnostic laboratories, which can lead to reporting the wrong results for the patient involved. Sample contamination can also lead to incorrect test reports. Avoiding sample identification error and sample contamination could be life-saving. Sample switch and sample contamination could happen on laboratory bench works, especially when pipetting into multi-well plates. It is difficult to realize such errors during laboratory bench work. Laboratory staff may not be aware of such an error when it happens. DNA fingerprinting technology can be used to determine sample identity and subsequently identify sample switch and sample contamination in the laboratory. Our laboratory has explored the usage of this technology in our quality control process and successfully established that DNA fingerprinting can be used to monitor sample switch and sample contamination in next-generation sequencing and BCR/ABL1 real-time PCR bench work.
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spelling doaj.art-c70b3aa4d50d4e2b927037cd27e2ae4c2023-11-24T04:13:20ZengMDPI AGCurrent Issues in Molecular Biology1467-30371467-30452022-11-0144115543554910.3390/cimb44110375Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular LaboratoriesDahui Qin0Mark Forster1Shital M. Gandhi2Ratilal Akabari3Zhong Zheng4Janella Lal5Katherine Lovinger6Molecular Diagnostic Laboratory, Moffitt Cancer Center, Tampa, FL 33612, USAMolecular Diagnostic Laboratory, Moffitt Cancer Center, Tampa, FL 33612, USAMolecular Diagnostic Laboratory, Moffitt Cancer Center, Tampa, FL 33612, USAMolecular Diagnostic Laboratory, State University of New York (SUNY), Upstate Medical University, Syracuse, NY 13210, USAMolecular Diagnostic Laboratory, Moffitt Cancer Center, Tampa, FL 33612, USAMolecular Diagnostic Laboratory, Emory University Hospital, Atlanta, GA 30322, USAOrlando Health (ORMC’s) Molecular Laboratory, Orlando, FL 32806, USASample identification error is a severe medical error in clinical molecular diagnostic laboratories, which can lead to reporting the wrong results for the patient involved. Sample contamination can also lead to incorrect test reports. Avoiding sample identification error and sample contamination could be life-saving. Sample switch and sample contamination could happen on laboratory bench works, especially when pipetting into multi-well plates. It is difficult to realize such errors during laboratory bench work. Laboratory staff may not be aware of such an error when it happens. DNA fingerprinting technology can be used to determine sample identity and subsequently identify sample switch and sample contamination in the laboratory. Our laboratory has explored the usage of this technology in our quality control process and successfully established that DNA fingerprinting can be used to monitor sample switch and sample contamination in next-generation sequencing and BCR/ABL1 real-time PCR bench work.https://www.mdpi.com/1467-3045/44/11/375quality controlsample switchsample contaminationsample errorDNA fingerprint
spellingShingle Dahui Qin
Mark Forster
Shital M. Gandhi
Ratilal Akabari
Zhong Zheng
Janella Lal
Katherine Lovinger
Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories
Current Issues in Molecular Biology
quality control
sample switch
sample contamination
sample error
DNA fingerprint
title Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories
title_full Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories
title_fullStr Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories
title_full_unstemmed Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories
title_short Usage of DNA Fingerprinting Technology to Check Sample Error and Contamination in Molecular Laboratories
title_sort usage of dna fingerprinting technology to check sample error and contamination in molecular laboratories
topic quality control
sample switch
sample contamination
sample error
DNA fingerprint
url https://www.mdpi.com/1467-3045/44/11/375
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