GPU-Q-J, a fast method for calculating root mean square deviation (RMSD) after optimal superposition

GPU-Q-J, a fast method for calculating root mean square deviation (RMSD) after optimal superposition

<p>Abstract</p> <p>Background</p> <p>Calculation of the root mean square deviation (RMSD) between the atomic coordinates of two optimally superposed structures is a basic component of structural comparison techniques. We describe a quaternion based method, GPU-Q-J, that...

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Bibliographic Details
Main Authors:	Guerquin Michal, Hung Ling-Hong, Samudrala Ram
Format:	Article
Language:	English
Published:	BMC 2011-04-01
Series:	BMC Research Notes
Online Access:	http://www.biomedcentral.com/1756-0500/4/97

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