The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chlor...
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Format: | Article |
Language: | English |
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Taylor & Francis Group
2021-06-01
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Series: | Mitochondrial DNA. Part B. Resources |
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Online Access: | http://dx.doi.org/10.1080/23802359.2021.1930601 |
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author | Wuchao Wang Xiangrong Fan Xiuling Li Yuanyuan Chen |
author_facet | Wuchao Wang Xiangrong Fan Xiuling Li Yuanyuan Chen |
author_sort | Wuchao Wang |
collection | DOAJ |
description | Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chloroplast genome size of T. incisa was 155, 453 bp, consisting of two inverted repeat (IR) regions (24, 388 bp), one large single copy (LSC) region (88, 398 bp) and one small single copy (SSC) region (18, 279 bp). A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. Among them, 19 genes were duplicated (6 protein-coding genes, 9 tRNA genes and 4 rRNA genes). The phylogenomic analysis suggested a close relationship between T. incisa and T. maximowiczii. |
first_indexed | 2024-03-11T13:08:56Z |
format | Article |
id | doaj.art-c84c01b66c734139ab1640f67af83843 |
institution | Directory Open Access Journal |
issn | 2380-2359 |
language | English |
last_indexed | 2024-03-11T13:08:56Z |
publishDate | 2021-06-01 |
publisher | Taylor & Francis Group |
record_format | Article |
series | Mitochondrial DNA. Part B. Resources |
spelling | doaj.art-c84c01b66c734139ab1640f67af838432023-11-03T14:16:11ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-06-01661732173310.1080/23802359.2021.19306011930601The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)Wuchao Wang0Xiangrong Fan1Xiuling Li2Yuanyuan Chen3Hubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of SciencesHubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of SciencesCollege of Life Science, Linyi UniversityHubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of SciencesTrapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chloroplast genome size of T. incisa was 155, 453 bp, consisting of two inverted repeat (IR) regions (24, 388 bp), one large single copy (LSC) region (88, 398 bp) and one small single copy (SSC) region (18, 279 bp). A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. Among them, 19 genes were duplicated (6 protein-coding genes, 9 tRNA genes and 4 rRNA genes). The phylogenomic analysis suggested a close relationship between T. incisa and T. maximowiczii.http://dx.doi.org/10.1080/23802359.2021.1930601trapa incisacomplete chloroplast genomelythraceaephylogeny |
spellingShingle | Wuchao Wang Xiangrong Fan Xiuling Li Yuanyuan Chen The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) Mitochondrial DNA. Part B. Resources trapa incisa complete chloroplast genome lythraceae phylogeny |
title | The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) |
title_full | The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) |
title_fullStr | The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) |
title_short | The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) |
title_sort | complete chloroplast genome sequence of trapa incisa sieb zucc lythraceae |
topic | trapa incisa complete chloroplast genome lythraceae phylogeny |
url | http://dx.doi.org/10.1080/23802359.2021.1930601 |
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