The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)

Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chlor...

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Main Authors: Wuchao Wang, Xiangrong Fan, Xiuling Li, Yuanyuan Chen
Format: Article
Language:English
Published: Taylor & Francis Group 2021-06-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
Online Access:http://dx.doi.org/10.1080/23802359.2021.1930601
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author Wuchao Wang
Xiangrong Fan
Xiuling Li
Yuanyuan Chen
author_facet Wuchao Wang
Xiangrong Fan
Xiuling Li
Yuanyuan Chen
author_sort Wuchao Wang
collection DOAJ
description Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chloroplast genome size of T. incisa was 155, 453 bp, consisting of two inverted repeat (IR) regions (24, 388 bp), one large single copy (LSC) region (88, 398 bp) and one small single copy (SSC) region (18, 279 bp). A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. Among them, 19 genes were duplicated (6 protein-coding genes, 9 tRNA genes and 4 rRNA genes). The phylogenomic analysis suggested a close relationship between T. incisa and T. maximowiczii.
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spelling doaj.art-c84c01b66c734139ab1640f67af838432023-11-03T14:16:11ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-06-01661732173310.1080/23802359.2021.19306011930601The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)Wuchao Wang0Xiangrong Fan1Xiuling Li2Yuanyuan Chen3Hubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of SciencesHubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of SciencesCollege of Life Science, Linyi UniversityHubei Key Laboratory of Wetland Evolution & Ecological Restoration, Wuhan Botanical Garden, Chinese Academy of SciencesTrapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chloroplast genome size of T. incisa was 155, 453 bp, consisting of two inverted repeat (IR) regions (24, 388 bp), one large single copy (LSC) region (88, 398 bp) and one small single copy (SSC) region (18, 279 bp). A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. Among them, 19 genes were duplicated (6 protein-coding genes, 9 tRNA genes and 4 rRNA genes). The phylogenomic analysis suggested a close relationship between T. incisa and T. maximowiczii.http://dx.doi.org/10.1080/23802359.2021.1930601trapa incisacomplete chloroplast genomelythraceaephylogeny
spellingShingle Wuchao Wang
Xiangrong Fan
Xiuling Li
Yuanyuan Chen
The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
Mitochondrial DNA. Part B. Resources
trapa incisa
complete chloroplast genome
lythraceae
phylogeny
title The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_full The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_fullStr The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_full_unstemmed The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_short The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_sort complete chloroplast genome sequence of trapa incisa sieb zucc lythraceae
topic trapa incisa
complete chloroplast genome
lythraceae
phylogeny
url http://dx.doi.org/10.1080/23802359.2021.1930601
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