The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells

Abstract The intracellular cholesterol transporter NPC1 functions in late endosomes and lysosomes to efflux unesterified cholesterol, and its deficiency causes Niemann–Pick disease Type C, an autosomal recessive lysosomal disorder characterized by progressive neurodegeneration and early death. Here,...

Full description

Bibliographic Details
Main Authors: Thaddeus J. Kunkel, Alice Townsend, Kyle A. Sullivan, Jean Merlet, Edward H. Schuchman, Daniel A. Jacobson, Andrew P. Lieberman
Format: Article
Language:English
Published: Nature Portfolio 2023-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-39733-6
_version_ 1797784515697967104
author Thaddeus J. Kunkel
Alice Townsend
Kyle A. Sullivan
Jean Merlet
Edward H. Schuchman
Daniel A. Jacobson
Andrew P. Lieberman
author_facet Thaddeus J. Kunkel
Alice Townsend
Kyle A. Sullivan
Jean Merlet
Edward H. Schuchman
Daniel A. Jacobson
Andrew P. Lieberman
author_sort Thaddeus J. Kunkel
collection DOAJ
description Abstract The intracellular cholesterol transporter NPC1 functions in late endosomes and lysosomes to efflux unesterified cholesterol, and its deficiency causes Niemann–Pick disease Type C, an autosomal recessive lysosomal disorder characterized by progressive neurodegeneration and early death. Here, we use single-nucleus RNA-seq on the forebrain of Npc1 −/− mice at P16 to identify cell types and pathways affected early in pathogenesis. Our analysis uncovers significant transcriptional changes in the oligodendrocyte lineage during developmental myelination, accompanied by diminished maturation of myelinating oligodendrocytes. We identify upregulation of genes associated with neurogenesis and synapse formation in Npc1 −/− oligodendrocyte lineage cells, reflecting diminished gene silencing by H3K27me3. Npc1 −/− oligodendrocyte progenitor cells reproduce impaired maturation in vitro, and this phenotype is rescued by treatment with GSK-J4, a small molecule inhibitor of H3K27 demethylases. Moreover, mobilizing stored cholesterol in Npc1 −/− mice by a single administration of 2-hydroxypropyl-β-cyclodextrin at P7 rescues myelination, epigenetic marks, and oligodendrocyte gene expression. Our findings highlight an important role for NPC1 in oligodendrocyte lineage maturation and epigenetic regulation, and identify potential targets for therapeutic intervention.
first_indexed 2024-03-13T00:41:01Z
format Article
id doaj.art-c8b6dbf7e23943d38d1303c4f334e573
institution Directory Open Access Journal
issn 2041-1723
language English
last_indexed 2024-03-13T00:41:01Z
publishDate 2023-07-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj.art-c8b6dbf7e23943d38d1303c4f334e5732023-07-09T11:19:21ZengNature PortfolioNature Communications2041-17232023-07-0114111710.1038/s41467-023-39733-6The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cellsThaddeus J. Kunkel0Alice Townsend1Kyle A. Sullivan2Jean Merlet3Edward H. Schuchman4Daniel A. Jacobson5Andrew P. Lieberman6Department of Pathology, University of Michigan Medical SchoolThe Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee KnoxvilleComputational and Predictive Biology, Oak Ridge National LaboratoryThe Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee KnoxvilleDepartment of Genetics and Genomic Sciences, The Icahn School of Medicine at Mount SinaiComputational and Predictive Biology, Oak Ridge National LaboratoryDepartment of Pathology, University of Michigan Medical SchoolAbstract The intracellular cholesterol transporter NPC1 functions in late endosomes and lysosomes to efflux unesterified cholesterol, and its deficiency causes Niemann–Pick disease Type C, an autosomal recessive lysosomal disorder characterized by progressive neurodegeneration and early death. Here, we use single-nucleus RNA-seq on the forebrain of Npc1 −/− mice at P16 to identify cell types and pathways affected early in pathogenesis. Our analysis uncovers significant transcriptional changes in the oligodendrocyte lineage during developmental myelination, accompanied by diminished maturation of myelinating oligodendrocytes. We identify upregulation of genes associated with neurogenesis and synapse formation in Npc1 −/− oligodendrocyte lineage cells, reflecting diminished gene silencing by H3K27me3. Npc1 −/− oligodendrocyte progenitor cells reproduce impaired maturation in vitro, and this phenotype is rescued by treatment with GSK-J4, a small molecule inhibitor of H3K27 demethylases. Moreover, mobilizing stored cholesterol in Npc1 −/− mice by a single administration of 2-hydroxypropyl-β-cyclodextrin at P7 rescues myelination, epigenetic marks, and oligodendrocyte gene expression. Our findings highlight an important role for NPC1 in oligodendrocyte lineage maturation and epigenetic regulation, and identify potential targets for therapeutic intervention.https://doi.org/10.1038/s41467-023-39733-6
spellingShingle Thaddeus J. Kunkel
Alice Townsend
Kyle A. Sullivan
Jean Merlet
Edward H. Schuchman
Daniel A. Jacobson
Andrew P. Lieberman
The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
Nature Communications
title The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
title_full The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
title_fullStr The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
title_full_unstemmed The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
title_short The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
title_sort cholesterol transporter npc1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells
url https://doi.org/10.1038/s41467-023-39733-6
work_keys_str_mv AT thaddeusjkunkel thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT alicetownsend thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT kyleasullivan thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT jeanmerlet thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT edwardhschuchman thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT danielajacobson thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT andrewplieberman thecholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT thaddeusjkunkel cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT alicetownsend cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT kyleasullivan cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT jeanmerlet cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT edwardhschuchman cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT danielajacobson cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells
AT andrewplieberman cholesteroltransporternpc1isessentialforepigeneticregulationandmaturationofoligodendrocytelineagecells