On the current status of Phakopsora pachyrhizi genome sequencing
Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last three years. Aside from the very rece...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Frontiers Media S.A.
2014-08-01
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| Series: | Frontiers in Plant Science |
| Subjects: | |
| Online Access: | http://journal.frontiersin.org/Journal/10.3389/fpls.2014.00377/full |
| _version_ | 1811241785965412352 |
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| author | Marco eLoehrer Alexander eVogel Bruno eHuettel Richard eReinhardt Vladimir eBenes Sébastien eDuplessis Bjoern eUsadel Bjoern eUsadel Ulrich eSchaffrath |
| author_facet | Marco eLoehrer Alexander eVogel Bruno eHuettel Richard eReinhardt Vladimir eBenes Sébastien eDuplessis Bjoern eUsadel Bjoern eUsadel Ulrich eSchaffrath |
| author_sort | Marco eLoehrer |
| collection | DOAJ |
| description | Recent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last three years. Aside from the very recent flax rust and poplar rust draft assemblies there are no genomic data available for other dicot-infecting rust fungi. In this article we outline rust fungus sequencing efforts and comment on the current status of Phakopsora pachyrhizi (Asian soybean rust) genome sequencing. |
| first_indexed | 2024-04-12T13:41:32Z |
| format | Article |
| id | doaj.art-c8c48780c8d04a7fb3739eb7c6abb68c |
| institution | Directory Open Access Journal |
| issn | 1664-462X |
| language | English |
| last_indexed | 2024-04-12T13:41:32Z |
| publishDate | 2014-08-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Plant Science |
| spelling | doaj.art-c8c48780c8d04a7fb3739eb7c6abb68c2022-12-22T03:30:50ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2014-08-01510.3389/fpls.2014.00377103762On the current status of Phakopsora pachyrhizi genome sequencingMarco eLoehrer0Alexander eVogel1Bruno eHuettel2Richard eReinhardt3Vladimir eBenes4Sébastien eDuplessis5Bjoern eUsadel6Bjoern eUsadel7Ulrich eSchaffrath8RWTH Aachen UniversityRWTH Aachen UniversityMax Planck Institute for Plant Breeding ResearchMax Planck Institute for Plant Breeding ResearchEMBL HeidelbergInstitut National de la Recherche AgronomiqueRWTH Aachen UniversityForschungszentrum JülichRWTH Aachen UniversityRecent advances in the field of sequencing technologies and bioinformatics allow a more rapid access to genomes of non-model organisms at sinking costs. Accordingly, draft genomes of several economically important cereal rust fungi have been released in the last three years. Aside from the very recent flax rust and poplar rust draft assemblies there are no genomic data available for other dicot-infecting rust fungi. In this article we outline rust fungus sequencing efforts and comment on the current status of Phakopsora pachyrhizi (Asian soybean rust) genome sequencing.http://journal.frontiersin.org/Journal/10.3389/fpls.2014.00377/fullrust fungiAsian soybean rustgenome informationk-mer analysisrust fungi genome sizes |
| spellingShingle | Marco eLoehrer Alexander eVogel Bruno eHuettel Richard eReinhardt Vladimir eBenes Sébastien eDuplessis Bjoern eUsadel Bjoern eUsadel Ulrich eSchaffrath On the current status of Phakopsora pachyrhizi genome sequencing Frontiers in Plant Science rust fungi Asian soybean rust genome information k-mer analysis rust fungi genome sizes |
| title | On the current status of Phakopsora pachyrhizi genome sequencing |
| title_full | On the current status of Phakopsora pachyrhizi genome sequencing |
| title_fullStr | On the current status of Phakopsora pachyrhizi genome sequencing |
| title_full_unstemmed | On the current status of Phakopsora pachyrhizi genome sequencing |
| title_short | On the current status of Phakopsora pachyrhizi genome sequencing |
| title_sort | on the current status of phakopsora pachyrhizi genome sequencing |
| topic | rust fungi Asian soybean rust genome information k-mer analysis rust fungi genome sizes |
| url | http://journal.frontiersin.org/Journal/10.3389/fpls.2014.00377/full |
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