Characterization of the complete chloroplast genome of Syzygium nervosum
Syzygium nervosum A.Cunn. ex DC (also named as Cleistocalyx operculatus) is a member of genus Syzygium mainly distributed in China, Vietnam and some other tropical countries and belongs the family of Myrtaceae. Syzygium nervosum is a popular medicinal plant, some species of genus Syzygium have been...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1894999 |
| _version_ | 1797638965183905792 |
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| author | Pan Li Weiyue Guo Kang Lei Lusha Ji |
| author_facet | Pan Li Weiyue Guo Kang Lei Lusha Ji |
| author_sort | Pan Li |
| collection | DOAJ |
| description | Syzygium nervosum A.Cunn. ex DC (also named as Cleistocalyx operculatus) is a member of genus Syzygium mainly distributed in China, Vietnam and some other tropical countries and belongs the family of Myrtaceae. Syzygium nervosum is a popular medicinal plant, some species of genus Syzygium have been used in folk medicine. In this study, we sequenced the sample of Syzygium nervosum and determined its complete chloroplast genome. The complete chloroplast genome of Syzygium nervosum is 158,979 bp in length, and contained a large single copy (LSC) with 88,099 bp in length, a small single copy (SSC) with 18,756 bp in length and two inverted repeat (IR) regions of 26,062 bp each. It includes 85 protein coding genes, 8 rRNA and 37 tRNA, and 37% overall GC content. Each of trnK-UUU, rps16, trnG-UCC, atpF, rpoC1, trnL-UAA, trnV-UAC, petB, petD, rpl16, rpl2, ndhB, trnI-GAU, trnA-UGC and ndhA genes contain an intron, the gene clpP and ycf3 contain 2 introns. The phylogenetic position shows that Syzygium nervosum has the closest relationship with Syzygium aromaticum. |
| first_indexed | 2024-03-11T13:11:00Z |
| format | Article |
| id | doaj.art-c9299d117d3f442fbb26b2db3b68292f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:00Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-c9299d117d3f442fbb26b2db3b68292f2023-11-03T14:16:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-01631014101510.1080/23802359.2021.18949991894999Characterization of the complete chloroplast genome of Syzygium nervosumPan Li0Weiyue Guo1Kang Lei2Lusha Ji3School of Pharmacy, Liaocheng UniversitySchool of Pharmacy, Liaocheng UniversitySchool of Pharmacy, Liaocheng UniversitySchool of Pharmacy, Liaocheng UniversitySyzygium nervosum A.Cunn. ex DC (also named as Cleistocalyx operculatus) is a member of genus Syzygium mainly distributed in China, Vietnam and some other tropical countries and belongs the family of Myrtaceae. Syzygium nervosum is a popular medicinal plant, some species of genus Syzygium have been used in folk medicine. In this study, we sequenced the sample of Syzygium nervosum and determined its complete chloroplast genome. The complete chloroplast genome of Syzygium nervosum is 158,979 bp in length, and contained a large single copy (LSC) with 88,099 bp in length, a small single copy (SSC) with 18,756 bp in length and two inverted repeat (IR) regions of 26,062 bp each. It includes 85 protein coding genes, 8 rRNA and 37 tRNA, and 37% overall GC content. Each of trnK-UUU, rps16, trnG-UCC, atpF, rpoC1, trnL-UAA, trnV-UAC, petB, petD, rpl16, rpl2, ndhB, trnI-GAU, trnA-UGC and ndhA genes contain an intron, the gene clpP and ycf3 contain 2 introns. The phylogenetic position shows that Syzygium nervosum has the closest relationship with Syzygium aromaticum.http://dx.doi.org/10.1080/23802359.2021.1894999syzygium nervosummyrtaceaecomplete chloroplast genome |
| spellingShingle | Pan Li Weiyue Guo Kang Lei Lusha Ji Characterization of the complete chloroplast genome of Syzygium nervosum Mitochondrial DNA. Part B. Resources syzygium nervosum myrtaceae complete chloroplast genome |
| title | Characterization of the complete chloroplast genome of Syzygium nervosum |
| title_full | Characterization of the complete chloroplast genome of Syzygium nervosum |
| title_fullStr | Characterization of the complete chloroplast genome of Syzygium nervosum |
| title_full_unstemmed | Characterization of the complete chloroplast genome of Syzygium nervosum |
| title_short | Characterization of the complete chloroplast genome of Syzygium nervosum |
| title_sort | characterization of the complete chloroplast genome of syzygium nervosum |
| topic | syzygium nervosum myrtaceae complete chloroplast genome |
| url | http://dx.doi.org/10.1080/23802359.2021.1894999 |
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