A new off-lattice HP model with side-chains for protein folding problem

A HP like nonlinear programming model and a “brutforce” algorithm is proposed. The model takes into account highest degree of complexity – different size of radiuses of side-chains, mentioned below as radicals, and two stages of the algorithm, including random structure initially and subsequent purp...

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Bibliographic Details
Main Authors: Todorin Ivan, Yanev Nicola, Traykov Metodi, Yurukov Borislav
Format: Article
Language:English
Published: EDP Sciences 2018-01-01
Series:ITM Web of Conferences
Online Access:https://doi.org/10.1051/itmconf/20181602007