Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli

Recombinant protein production with Escherichia coli is usually carried out in fed-batch mode in industry. As set-up and cleaning of equipment are time- and cost-intensive, it would be economically and environmentally favorable to reduce the number of these procedures. Switching from fed-batch to co...

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Main Authors: Julian Kopp, Stefan Kittler, Christoph Slouka, Christoph Herwig, Oliver Spadiut, David J. Wurm
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-11-01
Series:Frontiers in Bioengineering and Biotechnology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fbioe.2020.573607/full
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author Julian Kopp
Stefan Kittler
Christoph Slouka
Christoph Herwig
Oliver Spadiut
David J. Wurm
author_facet Julian Kopp
Stefan Kittler
Christoph Slouka
Christoph Herwig
Oliver Spadiut
David J. Wurm
author_sort Julian Kopp
collection DOAJ
description Recombinant protein production with Escherichia coli is usually carried out in fed-batch mode in industry. As set-up and cleaning of equipment are time- and cost-intensive, it would be economically and environmentally favorable to reduce the number of these procedures. Switching from fed-batch to continuous biomanufacturing with microbials is not yet applied as these cultivations still suffer from time-dependent variations in productivity. Repetitive fed-batch process technology facilitates critical equipment usage, reduces the environmental fingerprint and potentially increases the overall space-time yield. Surprisingly, studies on repetitive fed-batch processes for recombinant protein production can be found for yeasts only. Knowledge on repetitive fed-batch cultivation technology for recombinant protein production in E. coli is not available until now. In this study, a mixed feed approach, enabling repetitive fed-batch technology for recombinant protein production in E. coli, was developed. Effects of the cultivation mode on the space-time yield for a single-cycle fed-batch, a two-cycle repetitive fed-batch, a three-cycle repetitive fed batch and a chemostat cultivation were investigated. For that purpose, we used two different E. coli strains, expressing a model protein in the cytoplasm or in the periplasm, respectively. Our results demonstrate that a repetitive fed-batch for E. coli leads to a higher space-time yield compared to a single-cycle fed-batch and can potentially outperform continuous biomanufacturing. For the first time, we were able to show that repetitive fed-batch technology is highly suitable for recombinant protein production in E. coli using our mixed feeding approach, as it potentially (i) improves product throughput by using critical equipment to its full capacity and (ii) allows implementation of a more economic process by reducing cleaning and set-up times.
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spelling doaj.art-cb141ed4f8e24e8e882c747741f62b932022-12-22T01:21:12ZengFrontiers Media S.A.Frontiers in Bioengineering and Biotechnology2296-41852020-11-01810.3389/fbioe.2020.573607573607Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coliJulian KoppStefan KittlerChristoph SloukaChristoph HerwigOliver SpadiutDavid J. WurmRecombinant protein production with Escherichia coli is usually carried out in fed-batch mode in industry. As set-up and cleaning of equipment are time- and cost-intensive, it would be economically and environmentally favorable to reduce the number of these procedures. Switching from fed-batch to continuous biomanufacturing with microbials is not yet applied as these cultivations still suffer from time-dependent variations in productivity. Repetitive fed-batch process technology facilitates critical equipment usage, reduces the environmental fingerprint and potentially increases the overall space-time yield. Surprisingly, studies on repetitive fed-batch processes for recombinant protein production can be found for yeasts only. Knowledge on repetitive fed-batch cultivation technology for recombinant protein production in E. coli is not available until now. In this study, a mixed feed approach, enabling repetitive fed-batch technology for recombinant protein production in E. coli, was developed. Effects of the cultivation mode on the space-time yield for a single-cycle fed-batch, a two-cycle repetitive fed-batch, a three-cycle repetitive fed batch and a chemostat cultivation were investigated. For that purpose, we used two different E. coli strains, expressing a model protein in the cytoplasm or in the periplasm, respectively. Our results demonstrate that a repetitive fed-batch for E. coli leads to a higher space-time yield compared to a single-cycle fed-batch and can potentially outperform continuous biomanufacturing. For the first time, we were able to show that repetitive fed-batch technology is highly suitable for recombinant protein production in E. coli using our mixed feeding approach, as it potentially (i) improves product throughput by using critical equipment to its full capacity and (ii) allows implementation of a more economic process by reducing cleaning and set-up times.https://www.frontiersin.org/articles/10.3389/fbioe.2020.573607/fullE. colirepetitive fed-batchprocess understandingprocess intensificationrecombinant protein productioncontinuous biomanufacturing
spellingShingle Julian Kopp
Stefan Kittler
Christoph Slouka
Christoph Herwig
Oliver Spadiut
David J. Wurm
Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
Frontiers in Bioengineering and Biotechnology
E. coli
repetitive fed-batch
process understanding
process intensification
recombinant protein production
continuous biomanufacturing
title Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
title_full Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
title_fullStr Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
title_full_unstemmed Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
title_short Repetitive Fed-Batch: A Promising Process Mode for Biomanufacturing With E. coli
title_sort repetitive fed batch a promising process mode for biomanufacturing with e coli
topic E. coli
repetitive fed-batch
process understanding
process intensification
recombinant protein production
continuous biomanufacturing
url https://www.frontiersin.org/articles/10.3389/fbioe.2020.573607/full
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AT christophherwig repetitivefedbatchapromisingprocessmodeforbiomanufacturingwithecoli
AT oliverspadiut repetitivefedbatchapromisingprocessmodeforbiomanufacturingwithecoli
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