Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome
In this study, the complete mitochondrial genome yielded by next-generation sequencing of C. trilineatus was assembled and analyzed. The total length of the mitochondrial genome is 16,526 bp. It contains two ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes, and a major non-coding...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1797551 |
| _version_ | 1797639174124208128 |
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| author | Lei Chen Baohong Xu Tiaoyi Xiao Qiaolin Liu |
| author_facet | Lei Chen Baohong Xu Tiaoyi Xiao Qiaolin Liu |
| author_sort | Lei Chen |
| collection | DOAJ |
| description | In this study, the complete mitochondrial genome yielded by next-generation sequencing of C. trilineatus was assembled and analyzed. The total length of the mitochondrial genome is 16,526 bp. It contains two ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes, and a major non-coding control region . The arrangement of these genes is the same as that found in the Siluriformes. The complete mitogenomes of C. trilineatus and other 17 species from nine genera were used for phylogenetic analysis by UPGMA method. The topology demonstrated that all species are divided into three groups , and the C. trilineatus was clustered with C. rabauti and C. nattereri. |
| first_indexed | 2024-03-11T13:13:02Z |
| format | Article |
| id | doaj.art-cb3892833bbc498397ac7541523f26fa |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:02Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-cb3892833bbc498397ac7541523f26fa2023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533017301810.1080/23802359.2020.17975511797551Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genomeLei Chen0Baohong Xu1Tiaoyi Xiao2Qiaolin Liu3Hunan Engineering Technology Research Center of Featured Aquatic Resources Utilization, Hunan Agricultural UniversityHunan Engineering Technology Research Center of Featured Aquatic Resources Utilization, Hunan Agricultural UniversityHunan Engineering Technology Research Center of Featured Aquatic Resources Utilization, Hunan Agricultural UniversityHunan Engineering Technology Research Center of Featured Aquatic Resources Utilization, Hunan Agricultural UniversityIn this study, the complete mitochondrial genome yielded by next-generation sequencing of C. trilineatus was assembled and analyzed. The total length of the mitochondrial genome is 16,526 bp. It contains two ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes, and a major non-coding control region . The arrangement of these genes is the same as that found in the Siluriformes. The complete mitogenomes of C. trilineatus and other 17 species from nine genera were used for phylogenetic analysis by UPGMA method. The topology demonstrated that all species are divided into three groups , and the C. trilineatus was clustered with C. rabauti and C. nattereri.http://dx.doi.org/10.1080/23802359.2020.1797551corydoras trilineatusmitochondrial genomenext-generation sequencingphylogenetic analysis |
| spellingShingle | Lei Chen Baohong Xu Tiaoyi Xiao Qiaolin Liu Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome Mitochondrial DNA. Part B. Resources corydoras trilineatus mitochondrial genome next-generation sequencing phylogenetic analysis |
| title | Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome |
| title_full | Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome |
| title_fullStr | Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome |
| title_full_unstemmed | Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome |
| title_short | Characterization and phylogenetic analysis of Corydoras trilineatus mitochondrial genome |
| title_sort | characterization and phylogenetic analysis of corydoras trilineatus mitochondrial genome |
| topic | corydoras trilineatus mitochondrial genome next-generation sequencing phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1797551 |
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