Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept

Mixed cropping has been suggested as a resource-efficient approach to meet high produce demands while maintaining biodiversity and minimizing environmental impact. Current breeding programs do not select for enhanced general mixing ability (GMA) and neglect biological interactions within species mix...

Full description

Bibliographic Details
Main Authors: Benedikt Haug, Monika M. Messmer, Jérôme Enjalbert, Isabelle Goldringer, Emma Forst, Timothée Flutre, Tristan Mary-Huard, Pierre Hohmann
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-01-01
Series:Frontiers in Plant Science
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fpls.2020.620400/full
_version_ 1818382726723534848
author Benedikt Haug
Benedikt Haug
Monika M. Messmer
Jérôme Enjalbert
Isabelle Goldringer
Emma Forst
Timothée Flutre
Tristan Mary-Huard
Tristan Mary-Huard
Pierre Hohmann
author_facet Benedikt Haug
Benedikt Haug
Monika M. Messmer
Jérôme Enjalbert
Isabelle Goldringer
Emma Forst
Timothée Flutre
Tristan Mary-Huard
Tristan Mary-Huard
Pierre Hohmann
author_sort Benedikt Haug
collection DOAJ
description Mixed cropping has been suggested as a resource-efficient approach to meet high produce demands while maintaining biodiversity and minimizing environmental impact. Current breeding programs do not select for enhanced general mixing ability (GMA) and neglect biological interactions within species mixtures. Clear concepts and efficient experimental designs, adapted to breeding for mixed cropping and encoded into appropriate statistical models, are lacking. Thus, a model framework for GMA and SMA (specific mixing ability) was established. Results of a simulation study showed that an incomplete factorial design combines advantages of two commonly used full factorials, and enables to estimate GMA, SMA, and their variances in a resource-efficient way. This model was extended to the Producer (Pr) and Associate (As) concept to exploit additional information based on fraction yields. It was shown that the Pr/As concept allows to characterize genotypes for their contribution to total mixture yield, and, when relating to plant traits, allows to describe biological interaction functions (BIF) in a mixed crop. Incomplete factorial designs show the potential to drastically improve genetic gain by testing an increased number of genotypes using the same amount of resources. The Pr/As concept can further be employed to maximize GMA in an informed and efficient way. The BIF of a trait can be used to optimize species ratios at harvest as well as to extend our understanding of competitive and facilitative interactions in a mixed plant community. This study provides an integrative methodological framework to promote breeding for mixed cropping.
first_indexed 2024-12-14T02:55:03Z
format Article
id doaj.art-cb72547f2056417fbeb89070026795cc
institution Directory Open Access Journal
issn 1664-462X
language English
last_indexed 2024-12-14T02:55:03Z
publishDate 2021-01-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Plant Science
spelling doaj.art-cb72547f2056417fbeb89070026795cc2022-12-21T23:19:39ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2021-01-011110.3389/fpls.2020.620400620400Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate ConceptBenedikt Haug0Benedikt Haug1Monika M. Messmer2Jérôme Enjalbert3Isabelle Goldringer4Emma Forst5Timothée Flutre6Tristan Mary-Huard7Tristan Mary-Huard8Pierre Hohmann9Department of Crop Sciences, Research Institute of Organic Agriculture FiBL, Frick, SwitzerlandUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, FranceDepartment of Crop Sciences, Research Institute of Organic Agriculture FiBL, Frick, SwitzerlandUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, FranceUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, FranceDipartimento di Scienze Agrarie, Alimentari ed Ambientali (D3A), Università Politecnica delle Marche, Ancona, ItalyUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, FranceUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, FranceUMR MIA-Paris, AgroParisTech, INRA, Université Paris-Saclay, Paris, FranceDepartment of Crop Sciences, Research Institute of Organic Agriculture FiBL, Frick, SwitzerlandMixed cropping has been suggested as a resource-efficient approach to meet high produce demands while maintaining biodiversity and minimizing environmental impact. Current breeding programs do not select for enhanced general mixing ability (GMA) and neglect biological interactions within species mixtures. Clear concepts and efficient experimental designs, adapted to breeding for mixed cropping and encoded into appropriate statistical models, are lacking. Thus, a model framework for GMA and SMA (specific mixing ability) was established. Results of a simulation study showed that an incomplete factorial design combines advantages of two commonly used full factorials, and enables to estimate GMA, SMA, and their variances in a resource-efficient way. This model was extended to the Producer (Pr) and Associate (As) concept to exploit additional information based on fraction yields. It was shown that the Pr/As concept allows to characterize genotypes for their contribution to total mixture yield, and, when relating to plant traits, allows to describe biological interaction functions (BIF) in a mixed crop. Incomplete factorial designs show the potential to drastically improve genetic gain by testing an increased number of genotypes using the same amount of resources. The Pr/As concept can further be employed to maximize GMA in an informed and efficient way. The BIF of a trait can be used to optimize species ratios at harvest as well as to extend our understanding of competitive and facilitative interactions in a mixed plant community. This study provides an integrative methodological framework to promote breeding for mixed cropping.https://www.frontiersin.org/articles/10.3389/fpls.2020.620400/fullmixed croppingintercroppingbreedinggeneral mixing abilityproducer/associate conceptincomplete factorial design
spellingShingle Benedikt Haug
Benedikt Haug
Monika M. Messmer
Jérôme Enjalbert
Isabelle Goldringer
Emma Forst
Timothée Flutre
Tristan Mary-Huard
Tristan Mary-Huard
Pierre Hohmann
Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept
Frontiers in Plant Science
mixed cropping
intercropping
breeding
general mixing ability
producer/associate concept
incomplete factorial design
title Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept
title_full Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept
title_fullStr Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept
title_full_unstemmed Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept
title_short Advances in Breeding for Mixed Cropping – Incomplete Factorials and the Producer/Associate Concept
title_sort advances in breeding for mixed cropping incomplete factorials and the producer associate concept
topic mixed cropping
intercropping
breeding
general mixing ability
producer/associate concept
incomplete factorial design
url https://www.frontiersin.org/articles/10.3389/fpls.2020.620400/full
work_keys_str_mv AT benedikthaug advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT benedikthaug advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT monikammessmer advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT jeromeenjalbert advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT isabellegoldringer advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT emmaforst advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT timotheeflutre advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT tristanmaryhuard advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT tristanmaryhuard advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept
AT pierrehohmann advancesinbreedingformixedcroppingincompletefactorialsandtheproducerassociateconcept