The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China
The complete chloroplast genome sequence of Populus xiangchengensis C. Wang et Tung, an endemic species in southwest China, is presented in this study. The total genome size is 156,465 bp, with a typical quadripartite structure including a pair of inverted repeat (IRs, 27,570 bp) regions separated b...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1536463 |
| _version_ | 1827774164298104832 |
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| author | Dan Zong Anpei Zhou Dan Li Chengzhong He |
| author_facet | Dan Zong Anpei Zhou Dan Li Chengzhong He |
| author_sort | Dan Zong |
| collection | DOAJ |
| description | The complete chloroplast genome sequence of Populus xiangchengensis C. Wang et Tung, an endemic species in southwest China, is presented in this study. The total genome size is 156,465 bp, with a typical quadripartite structure including a pair of inverted repeat (IRs, 27,570 bp) regions separated by a large single copy (LSC, 84,812 bp) region and a small single copy (SSC, 16,513 bp) region. The overall GC content of P. xiangchengensis plastid genome is 36.74%. The genome contains 130 genes, including 85 protein-coding genes, 37 transfer RNA genes, and eight ribosomal RNA genes. Among these genes, 12 genes have one intron and three genes contain two introns. The phylogenetic tree based on 26 complete plastomes of Salicaceae support close relationships among P. xiangchengensis, P. cathayana, and P. szechuanica. |
| first_indexed | 2024-03-11T13:33:53Z |
| format | Article |
| id | doaj.art-cfb66ca93e4b4d34b62ca9a1645ecf9c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:53Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-cfb66ca93e4b4d34b62ca9a1645ecf9c2023-11-02T16:07:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-0141707110.1080/23802359.2018.15364631536463The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest ChinaDan Zong0Anpei Zhou1Dan Li2Chengzhong He3Southwest Forestry UniversitySouthwest Forestry UniversityYunnan Academy of Biodiversity Southwest Forestry UniversitySouthwest Forestry UniversityThe complete chloroplast genome sequence of Populus xiangchengensis C. Wang et Tung, an endemic species in southwest China, is presented in this study. The total genome size is 156,465 bp, with a typical quadripartite structure including a pair of inverted repeat (IRs, 27,570 bp) regions separated by a large single copy (LSC, 84,812 bp) region and a small single copy (SSC, 16,513 bp) region. The overall GC content of P. xiangchengensis plastid genome is 36.74%. The genome contains 130 genes, including 85 protein-coding genes, 37 transfer RNA genes, and eight ribosomal RNA genes. Among these genes, 12 genes have one intron and three genes contain two introns. The phylogenetic tree based on 26 complete plastomes of Salicaceae support close relationships among P. xiangchengensis, P. cathayana, and P. szechuanica.http://dx.doi.org/10.1080/23802359.2018.1536463populus xiangchengensisendemic specieschloroplast genome |
| spellingShingle | Dan Zong Anpei Zhou Dan Li Chengzhong He The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China Mitochondrial DNA. Part B. Resources populus xiangchengensis endemic species chloroplast genome |
| title | The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China |
| title_full | The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China |
| title_fullStr | The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China |
| title_full_unstemmed | The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China |
| title_short | The complete chloroplast genome of Populus xiangchengensis, an endemic species in Southwest China |
| title_sort | complete chloroplast genome of populus xiangchengensis an endemic species in southwest china |
| topic | populus xiangchengensis endemic species chloroplast genome |
| url | http://dx.doi.org/10.1080/23802359.2018.1536463 |
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