The complete plastome sequences of nine diploid potato clones
Potato (Solanum tuberosum L.) is the world’s fourth most important food crop and essential for global food security. The potato chloroplast genomes, the plastomes, are highly conserved and are largely studied for their maternal lineages. In this study, we assembled the complete circular plastome seq...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1883486 |
| _version_ | 1827772566129868800 |
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| author | Sai Reddy Achakkagari Helen H. Tai Charlotte Davidson Hielke De Jong Martina V. Strömvik |
| author_facet | Sai Reddy Achakkagari Helen H. Tai Charlotte Davidson Hielke De Jong Martina V. Strömvik |
| author_sort | Sai Reddy Achakkagari |
| collection | DOAJ |
| description | Potato (Solanum tuberosum L.) is the world’s fourth most important food crop and essential for global food security. The potato chloroplast genomes, the plastomes, are highly conserved and are largely studied for their maternal lineages. In this study, we assembled the complete circular plastome sequences of nine diploid potato clones, with sizes ranging between 155,296 bp and 155,564 bp. Annotation of these plastomes reveals that they each have 141 genes in a similar order. The computational chloroplast DNA typing reveals three plastid DNA types among the nine plastomes and they are grouped according to these types in the phylogeny. |
| first_indexed | 2024-03-11T13:11:02Z |
| format | Article |
| id | doaj.art-cfe5382cc90c434f9078d7478d8d25c4 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:02Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-cfe5382cc90c434f9078d7478d8d25c42023-11-03T14:08:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-016381181310.1080/23802359.2021.18834861883486The complete plastome sequences of nine diploid potato clonesSai Reddy Achakkagari0Helen H. Tai1Charlotte Davidson2Hielke De Jong3Martina V. Strömvik4Department of Plant Science, McGill UniversityFredericton Research and Development Centre, Agriculture and Agri-Food CanadaFredericton Research and Development Centre, Agriculture and Agri-Food CanadaFredericton Research and Development Centre, Agriculture and Agri-Food CanadaDepartment of Plant Science, McGill UniversityPotato (Solanum tuberosum L.) is the world’s fourth most important food crop and essential for global food security. The potato chloroplast genomes, the plastomes, are highly conserved and are largely studied for their maternal lineages. In this study, we assembled the complete circular plastome sequences of nine diploid potato clones, with sizes ranging between 155,296 bp and 155,564 bp. Annotation of these plastomes reveals that they each have 141 genes in a similar order. The computational chloroplast DNA typing reveals three plastid DNA types among the nine plastomes and they are grouped according to these types in the phylogeny.http://dx.doi.org/10.1080/23802359.2021.1883486chloroplastpotatosolanumplastome assembly |
| spellingShingle | Sai Reddy Achakkagari Helen H. Tai Charlotte Davidson Hielke De Jong Martina V. Strömvik The complete plastome sequences of nine diploid potato clones Mitochondrial DNA. Part B. Resources chloroplast potato solanum plastome assembly |
| title | The complete plastome sequences of nine diploid potato clones |
| title_full | The complete plastome sequences of nine diploid potato clones |
| title_fullStr | The complete plastome sequences of nine diploid potato clones |
| title_full_unstemmed | The complete plastome sequences of nine diploid potato clones |
| title_short | The complete plastome sequences of nine diploid potato clones |
| title_sort | complete plastome sequences of nine diploid potato clones |
| topic | chloroplast potato solanum plastome assembly |
| url | http://dx.doi.org/10.1080/23802359.2021.1883486 |
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