The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae)
Paeonia delavayi is a medicinal plant commonly used in southwest of China. In this study, we sequenced the complete chloroplast (cp) genome sequence of P. delavayi to investigate its phylogenetic relationship in the family Paeoniaceae. The chloroplast genome of P. delavayi was 152,872 bp in length w...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2019-07-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1677528 |
| _version_ | 1797639598050902016 |
|---|---|
| author | Aien Tao Feiya Zhao Conglong Xia |
| author_facet | Aien Tao Feiya Zhao Conglong Xia |
| author_sort | Aien Tao |
| collection | DOAJ |
| description | Paeonia delavayi is a medicinal plant commonly used in southwest of China. In this study, we sequenced the complete chloroplast (cp) genome sequence of P. delavayi to investigate its phylogenetic relationship in the family Paeoniaceae. The chloroplast genome of P. delavayi was 152,872 bp in length with 38.4% overall GC content, including a large single copy (LSC) region of 84,523 bp, a small single copy (SSC) region of 17,053 bp and a pair of inverted repeats (IRs) of 25,646 bp. The cp genome contained 105 genes, including 75 protein coding genes, 27 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated P. delavayi was closely related to P. ludlowii. |
| first_indexed | 2024-03-11T13:19:56Z |
| format | Article |
| id | doaj.art-d0298fc43ae7490580dc6543c629d4f7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:19:56Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-d0298fc43ae7490580dc6543c629d4f72023-11-03T10:38:50ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01423553355510.1080/23802359.2019.16775281677528The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae)Aien Tao0Feiya Zhao1Conglong Xia2Dali UniversityDali UniversityDali UniversityPaeonia delavayi is a medicinal plant commonly used in southwest of China. In this study, we sequenced the complete chloroplast (cp) genome sequence of P. delavayi to investigate its phylogenetic relationship in the family Paeoniaceae. The chloroplast genome of P. delavayi was 152,872 bp in length with 38.4% overall GC content, including a large single copy (LSC) region of 84,523 bp, a small single copy (SSC) region of 17,053 bp and a pair of inverted repeats (IRs) of 25,646 bp. The cp genome contained 105 genes, including 75 protein coding genes, 27 tRNA genes, and 4 rRNA genes. The phylogenetic analysis indicated P. delavayi was closely related to P. ludlowii.http://dx.doi.org/10.1080/23802359.2019.1677528paeonia delavayichloroplastillumina sequencingphylogeny |
| spellingShingle | Aien Tao Feiya Zhao Conglong Xia The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae) Mitochondrial DNA. Part B. Resources paeonia delavayi chloroplast illumina sequencing phylogeny |
| title | The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae) |
| title_full | The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae) |
| title_fullStr | The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae) |
| title_short | The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae) |
| title_sort | complete chloroplast genome sequence of the medicinal plant paeonia delavayi franchet paeoniaceae |
| topic | paeonia delavayi chloroplast illumina sequencing phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2019.1677528 |
| work_keys_str_mv | AT aientao thecompletechloroplastgenomesequenceofthemedicinalplantpaeoniadelavayifranchetpaeoniaceae AT feiyazhao thecompletechloroplastgenomesequenceofthemedicinalplantpaeoniadelavayifranchetpaeoniaceae AT conglongxia thecompletechloroplastgenomesequenceofthemedicinalplantpaeoniadelavayifranchetpaeoniaceae AT aientao completechloroplastgenomesequenceofthemedicinalplantpaeoniadelavayifranchetpaeoniaceae AT feiyazhao completechloroplastgenomesequenceofthemedicinalplantpaeoniadelavayifranchetpaeoniaceae AT conglongxia completechloroplastgenomesequenceofthemedicinalplantpaeoniadelavayifranchetpaeoniaceae |