Genome Replication Is Associated With Release of Immunogenic DNA Waste

Innate DNA sensors detect foreign and endogenous DNA to induce responses to infection and cellular stress or damage. Inappropriate activation by self-DNA triggers severe autoinflammatory conditions, including Aicardi-Goutières syndrome (AGS) that can be caused by defects of the cytosolic DNase 3’rep...

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Main Authors: Nadja Schubert, Tina Schumann, Elena Daum, Karolin Flade, Yan Ge, Lara Hagedorn, Winfried Edelmann, Luise Müller, Marc Schmitz, Gunnar Kuut, Veit Hornung, Rayk Behrendt, Axel Roers
Format: Article
Language:English
Published: Frontiers Media S.A. 2022-05-01
Series:Frontiers in Immunology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fimmu.2022.880413/full
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author Nadja Schubert
Tina Schumann
Elena Daum
Karolin Flade
Yan Ge
Lara Hagedorn
Winfried Edelmann
Luise Müller
Marc Schmitz
Marc Schmitz
Marc Schmitz
Gunnar Kuut
Veit Hornung
Rayk Behrendt
Rayk Behrendt
Axel Roers
Axel Roers
author_facet Nadja Schubert
Tina Schumann
Elena Daum
Karolin Flade
Yan Ge
Lara Hagedorn
Winfried Edelmann
Luise Müller
Marc Schmitz
Marc Schmitz
Marc Schmitz
Gunnar Kuut
Veit Hornung
Rayk Behrendt
Rayk Behrendt
Axel Roers
Axel Roers
author_sort Nadja Schubert
collection DOAJ
description Innate DNA sensors detect foreign and endogenous DNA to induce responses to infection and cellular stress or damage. Inappropriate activation by self-DNA triggers severe autoinflammatory conditions, including Aicardi-Goutières syndrome (AGS) that can be caused by defects of the cytosolic DNase 3’repair exonuclease 1 (TREX1). TREX1 loss-of-function alleles are also associated with systemic lupus erythematosus (SLE). Chronic activation of innate antiviral immunity in TREX1-deficient cells depends on the DNA sensor cGAS, implying that accumulating TREX1 DNA substrates cause the inflammatory pathology. Retrotransposon-derived cDNAs were shown to activate cGAS in TREX1-deficient neuronal cells. We addressed other endogenous sources of cGAS ligands in cells lacking TREX1. We find that induced loss of TREX1 in primary cells induces a rapid IFN response that requires ongoing proliferation. The inflammatory phenotype of Trex1-/- mice was partially rescued by additional knock out of exonuclease 1, a multifunctional enzyme providing 5’ flap endonuclease activity for Okazaki fragment processing and postreplicative ribonucleotide excision repair. Our data imply genome replication as a source of DNA waste with pathogenic potential that is efficiently degraded by TREX1.
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spelling doaj.art-d0c9705d51ca42bdb9c763b7317983dc2022-12-22T00:37:52ZengFrontiers Media S.A.Frontiers in Immunology1664-32242022-05-011310.3389/fimmu.2022.880413880413Genome Replication Is Associated With Release of Immunogenic DNA WasteNadja Schubert0Tina Schumann1Elena Daum2Karolin Flade3Yan Ge4Lara Hagedorn5Winfried Edelmann6Luise Müller7Marc Schmitz8Marc Schmitz9Marc Schmitz10Gunnar Kuut11Veit Hornung12Rayk Behrendt13Rayk Behrendt14Axel Roers15Axel Roers16Institute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY, United StatesInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyNational Center for Tumor Diseases (NCT), University Hospital Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyGerman Cancer Consortium (DKTK), Partner Site Dresden, and German Cancer Research Center (DKFZ), Heidelberg, GermanyGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität München, Munich, GermanyGene Center and Department of Biochemistry, Ludwig-Maximilians-Universität München, Munich, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Clinical Chemistry and Clinical Pharmacology, University Hospital Bonn, Bonn, GermanyInstitute for Immunology, Medical Faculty Carl Gustav Carus, University of Technology (TU) Dresden, Dresden, GermanyInstitute for Immunology, University Hospital Heidelberg, Heidelberg, GermanyInnate DNA sensors detect foreign and endogenous DNA to induce responses to infection and cellular stress or damage. Inappropriate activation by self-DNA triggers severe autoinflammatory conditions, including Aicardi-Goutières syndrome (AGS) that can be caused by defects of the cytosolic DNase 3’repair exonuclease 1 (TREX1). TREX1 loss-of-function alleles are also associated with systemic lupus erythematosus (SLE). Chronic activation of innate antiviral immunity in TREX1-deficient cells depends on the DNA sensor cGAS, implying that accumulating TREX1 DNA substrates cause the inflammatory pathology. Retrotransposon-derived cDNAs were shown to activate cGAS in TREX1-deficient neuronal cells. We addressed other endogenous sources of cGAS ligands in cells lacking TREX1. We find that induced loss of TREX1 in primary cells induces a rapid IFN response that requires ongoing proliferation. The inflammatory phenotype of Trex1-/- mice was partially rescued by additional knock out of exonuclease 1, a multifunctional enzyme providing 5’ flap endonuclease activity for Okazaki fragment processing and postreplicative ribonucleotide excision repair. Our data imply genome replication as a source of DNA waste with pathogenic potential that is efficiently degraded by TREX1.https://www.frontiersin.org/articles/10.3389/fimmu.2022.880413/fullTrex1type I interferonExo1replicationcytosolic DNAinterferonopathy
spellingShingle Nadja Schubert
Tina Schumann
Elena Daum
Karolin Flade
Yan Ge
Lara Hagedorn
Winfried Edelmann
Luise Müller
Marc Schmitz
Marc Schmitz
Marc Schmitz
Gunnar Kuut
Veit Hornung
Rayk Behrendt
Rayk Behrendt
Axel Roers
Axel Roers
Genome Replication Is Associated With Release of Immunogenic DNA Waste
Frontiers in Immunology
Trex1
type I interferon
Exo1
replication
cytosolic DNA
interferonopathy
title Genome Replication Is Associated With Release of Immunogenic DNA Waste
title_full Genome Replication Is Associated With Release of Immunogenic DNA Waste
title_fullStr Genome Replication Is Associated With Release of Immunogenic DNA Waste
title_full_unstemmed Genome Replication Is Associated With Release of Immunogenic DNA Waste
title_short Genome Replication Is Associated With Release of Immunogenic DNA Waste
title_sort genome replication is associated with release of immunogenic dna waste
topic Trex1
type I interferon
Exo1
replication
cytosolic DNA
interferonopathy
url https://www.frontiersin.org/articles/10.3389/fimmu.2022.880413/full
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