Vive la Persistence: Engineering Human Microbiomes in the 21st Century

ABSTRACT I imagine a future in which children grow up with healthy microbial communities. Engineering human microbiomes might actually be achievable in the near future, as we enter an era of hunting for human-adapted bacterial strains and phages. Furthermore, breath metabolites could allow us to tra...

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Main Author: Katrine L. Whiteson
Format: Article
Language:English
Published: American Society for Microbiology 2018-04-01
Series:mSystems
Subjects:
Online Access:https://journals.asm.org/doi/10.1128/mSystems.00166-17
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author Katrine L. Whiteson
author_facet Katrine L. Whiteson
author_sort Katrine L. Whiteson
collection DOAJ
description ABSTRACT I imagine a future in which children grow up with healthy microbial communities. Engineering human microbiomes might actually be achievable in the near future, as we enter an era of hunting for human-adapted bacterial strains and phages. Furthermore, breath metabolites could allow us to track whether a probiotic colonizes persistently or a phage has knocked down a microbe of interest. Recent successes with probiotics, such as bifidobacteria that can break down human milk oligosaccharides, are making a future in which infants are intentionally colonized with health-promoting strains seem less unlikely. Viruses that infect bacteria, bacteriophages, are also important for human health both because of their role in the human microbiome and because of their potential for use in phage therapy. Monitoring the outcome of microbiome-focused interventions with breath volatile sampling is also on the horizon, which could mean real-time tracking of microbial metabolite production. Studies of early life during microbiome assembly, when the potential for effective interventions to reduce disease risk is greatest, are essential.
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spelling doaj.art-d0f58774d26f4829bfe4722f3228b2bf2022-12-21T23:08:46ZengAmerican Society for MicrobiologymSystems2379-50772018-04-013210.1128/mSystems.00166-17Vive la Persistence: Engineering Human Microbiomes in the 21st CenturyKatrine L. Whiteson0Department of Molecular Biology & Biochemistry, University of California, Irvine, California, USAABSTRACT I imagine a future in which children grow up with healthy microbial communities. Engineering human microbiomes might actually be achievable in the near future, as we enter an era of hunting for human-adapted bacterial strains and phages. Furthermore, breath metabolites could allow us to track whether a probiotic colonizes persistently or a phage has knocked down a microbe of interest. Recent successes with probiotics, such as bifidobacteria that can break down human milk oligosaccharides, are making a future in which infants are intentionally colonized with health-promoting strains seem less unlikely. Viruses that infect bacteria, bacteriophages, are also important for human health both because of their role in the human microbiome and because of their potential for use in phage therapy. Monitoring the outcome of microbiome-focused interventions with breath volatile sampling is also on the horizon, which could mean real-time tracking of microbial metabolite production. Studies of early life during microbiome assembly, when the potential for effective interventions to reduce disease risk is greatest, are essential.https://journals.asm.org/doi/10.1128/mSystems.00166-17metabolomicsmicrobiomephage therapy
spellingShingle Katrine L. Whiteson
Vive la Persistence: Engineering Human Microbiomes in the 21st Century
mSystems
metabolomics
microbiome
phage therapy
title Vive la Persistence: Engineering Human Microbiomes in the 21st Century
title_full Vive la Persistence: Engineering Human Microbiomes in the 21st Century
title_fullStr Vive la Persistence: Engineering Human Microbiomes in the 21st Century
title_full_unstemmed Vive la Persistence: Engineering Human Microbiomes in the 21st Century
title_short Vive la Persistence: Engineering Human Microbiomes in the 21st Century
title_sort vive la persistence engineering human microbiomes in the 21st century
topic metabolomics
microbiome
phage therapy
url https://journals.asm.org/doi/10.1128/mSystems.00166-17
work_keys_str_mv AT katrinelwhiteson vivelapersistenceengineeringhumanmicrobiomesinthe21stcentury