Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates

Molecular aggregates are of interest to a broad range of fields including light harvesting, organic optoelectronics, and nanoscale computing. In molecular aggregates, nonradiative decay pathways may emerge that were not present in the constituent molecules. Such nonradiative decay pathways may inclu...

Full description

Bibliographic Details
Main Authors: Katelyn M. Duncan, Donald L. Kellis, Jonathan S. Huff, Matthew S. Barclay, Jeunghoon Lee, Daniel B. Turner, Paul H. Davis, Bernard Yurke, William B. Knowlton, Ryan D. Pensack
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Molecules
Subjects:
Online Access:https://www.mdpi.com/1420-3049/27/19/6612
_version_ 1797477885213147136
author Katelyn M. Duncan
Donald L. Kellis
Jonathan S. Huff
Matthew S. Barclay
Jeunghoon Lee
Daniel B. Turner
Paul H. Davis
Bernard Yurke
William B. Knowlton
Ryan D. Pensack
author_facet Katelyn M. Duncan
Donald L. Kellis
Jonathan S. Huff
Matthew S. Barclay
Jeunghoon Lee
Daniel B. Turner
Paul H. Davis
Bernard Yurke
William B. Knowlton
Ryan D. Pensack
author_sort Katelyn M. Duncan
collection DOAJ
description Molecular aggregates are of interest to a broad range of fields including light harvesting, organic optoelectronics, and nanoscale computing. In molecular aggregates, nonradiative decay pathways may emerge that were not present in the constituent molecules. Such nonradiative decay pathways may include singlet fission, excimer relaxation, and symmetry-breaking charge transfer. Singlet fission, sometimes referred to as excitation multiplication, is of great interest to the fields of energy conversion and quantum information. For example, endothermic singlet fission, which avoids energy loss, has been observed in covalently bound, linear perylene trimers and tetramers. In this work, the electronic structure and excited-state dynamics of dimers of a perylene derivative templated using DNA were investigated. Specifically, DNA Holliday junctions were used to template the aggregation of two perylene molecules covalently linked to a modified uracil nucleobase through an ethynyl group. The perylenes were templated in the form of monomer, transverse dimer, and adjacent dimer configurations. The electronic structure of the perylene monomers and dimers were characterized via steady-state absorption and fluorescence spectroscopy. Initial insights into their excited-state dynamics were gleaned from relative fluorescence intensity measurements, which indicated that a new nonradiative decay pathway emerges in the dimers. Femtosecond visible transient absorption spectroscopy was subsequently used to elucidate the excited-state dynamics. A new excited-state absorption feature grows in on the tens of picosecond timescale in the dimers, which is attributed to the formation of perylene anions and cations resulting from symmetry-breaking charge transfer. Given the close proximity required for symmetry-breaking charge transfer, the results shed promising light on the prospect of singlet fission in DNA-templated molecular aggregates.
first_indexed 2024-03-09T21:24:06Z
format Article
id doaj.art-d1e2a38dff3747cfa99c26fa032c35a5
institution Directory Open Access Journal
issn 1420-3049
language English
last_indexed 2024-03-09T21:24:06Z
publishDate 2022-10-01
publisher MDPI AG
record_format Article
series Molecules
spelling doaj.art-d1e2a38dff3747cfa99c26fa032c35a52023-11-23T21:14:18ZengMDPI AGMolecules1420-30492022-10-012719661210.3390/molecules27196612Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer AggregatesKatelyn M. Duncan0Donald L. Kellis1Jonathan S. Huff2Matthew S. Barclay3Jeunghoon Lee4Daniel B. Turner5Paul H. Davis6Bernard Yurke7William B. Knowlton8Ryan D. Pensack9Micron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMicron School of Materials Science & Engineering, Boise State University, Boise, ID 83725, USAMolecular aggregates are of interest to a broad range of fields including light harvesting, organic optoelectronics, and nanoscale computing. In molecular aggregates, nonradiative decay pathways may emerge that were not present in the constituent molecules. Such nonradiative decay pathways may include singlet fission, excimer relaxation, and symmetry-breaking charge transfer. Singlet fission, sometimes referred to as excitation multiplication, is of great interest to the fields of energy conversion and quantum information. For example, endothermic singlet fission, which avoids energy loss, has been observed in covalently bound, linear perylene trimers and tetramers. In this work, the electronic structure and excited-state dynamics of dimers of a perylene derivative templated using DNA were investigated. Specifically, DNA Holliday junctions were used to template the aggregation of two perylene molecules covalently linked to a modified uracil nucleobase through an ethynyl group. The perylenes were templated in the form of monomer, transverse dimer, and adjacent dimer configurations. The electronic structure of the perylene monomers and dimers were characterized via steady-state absorption and fluorescence spectroscopy. Initial insights into their excited-state dynamics were gleaned from relative fluorescence intensity measurements, which indicated that a new nonradiative decay pathway emerges in the dimers. Femtosecond visible transient absorption spectroscopy was subsequently used to elucidate the excited-state dynamics. A new excited-state absorption feature grows in on the tens of picosecond timescale in the dimers, which is attributed to the formation of perylene anions and cations resulting from symmetry-breaking charge transfer. Given the close proximity required for symmetry-breaking charge transfer, the results shed promising light on the prospect of singlet fission in DNA-templated molecular aggregates.https://www.mdpi.com/1420-3049/27/19/6612perylenedimer aggregateDNA nanotechnologysinglet fissioncharge transfer
spellingShingle Katelyn M. Duncan
Donald L. Kellis
Jonathan S. Huff
Matthew S. Barclay
Jeunghoon Lee
Daniel B. Turner
Paul H. Davis
Bernard Yurke
William B. Knowlton
Ryan D. Pensack
Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
Molecules
perylene
dimer aggregate
DNA nanotechnology
singlet fission
charge transfer
title Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
title_full Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
title_fullStr Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
title_full_unstemmed Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
title_short Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
title_sort symmetry breaking charge transfer in dna templated perylene dimer aggregates
topic perylene
dimer aggregate
DNA nanotechnology
singlet fission
charge transfer
url https://www.mdpi.com/1420-3049/27/19/6612
work_keys_str_mv AT katelynmduncan symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT donaldlkellis symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT jonathanshuff symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT matthewsbarclay symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT jeunghoonlee symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT danielbturner symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT paulhdavis symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT bernardyurke symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT williambknowlton symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates
AT ryandpensack symmetrybreakingchargetransferindnatemplatedperylenedimeraggregates