Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5

Abstract Spacer acquisition step in CRISPR-Cas system involves the recognition and subsequent integration of protospacer by the Cas1-Cas2 complex in CRISPR-Cas systems. Here we report an anti-CRISPR protein, AcrVA5, and reveal the mechanisms by which it strongly inhibits protospacer integration. Our...

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Main Authors: Mingfang Bi, Wenjing Su, Jiafu Li, Xiaobing Mo
Format: Article
Language:English
Published: Nature Portfolio 2024-04-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-024-47713-7
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author Mingfang Bi
Wenjing Su
Jiafu Li
Xiaobing Mo
author_facet Mingfang Bi
Wenjing Su
Jiafu Li
Xiaobing Mo
author_sort Mingfang Bi
collection DOAJ
description Abstract Spacer acquisition step in CRISPR-Cas system involves the recognition and subsequent integration of protospacer by the Cas1-Cas2 complex in CRISPR-Cas systems. Here we report an anti-CRISPR protein, AcrVA5, and reveal the mechanisms by which it strongly inhibits protospacer integration. Our biochemical data shows that the integration by Cas1-Cas2 was abrogated in the presence of AcrVA5. AcrVA5 exhibits low binding affinity towards Cas2 and acetylates Cas2 at Lys55 on the binding interface of the Cas2 and AcrVA5 N-terminal peptide complex to inhibit the Cas2-mediated endonuclease activity. Moreover, a detailed structural comparison between our crystal structure and homolog structure shows that binding of AcrVA5 to Cas2 causes steric hindrance to the neighboring protospacer resulting in the partial disassembly of the Cas1-Cas2 and protospacer complex, as demonstrated by electrophoretic mobility shift assay. Our study focuses on this mechanism of spacer acquisition inhibition and provides insights into the biology of CRISPR-Cas systems.
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spelling doaj.art-d29eac74d51c44ffafe3bc5294852f9d2024-04-21T11:23:24ZengNature PortfolioNature Communications2041-17232024-04-0115111210.1038/s41467-024-47713-7Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5Mingfang Bi0Wenjing Su1Jiafu Li2Xiaobing Mo3College of Veterinary Medicine, Jilin UniversityCollege of Veterinary Medicine, Jilin UniversityCollege of Veterinary Medicine, Jilin UniversityCollege of Veterinary Medicine, Jilin UniversityAbstract Spacer acquisition step in CRISPR-Cas system involves the recognition and subsequent integration of protospacer by the Cas1-Cas2 complex in CRISPR-Cas systems. Here we report an anti-CRISPR protein, AcrVA5, and reveal the mechanisms by which it strongly inhibits protospacer integration. Our biochemical data shows that the integration by Cas1-Cas2 was abrogated in the presence of AcrVA5. AcrVA5 exhibits low binding affinity towards Cas2 and acetylates Cas2 at Lys55 on the binding interface of the Cas2 and AcrVA5 N-terminal peptide complex to inhibit the Cas2-mediated endonuclease activity. Moreover, a detailed structural comparison between our crystal structure and homolog structure shows that binding of AcrVA5 to Cas2 causes steric hindrance to the neighboring protospacer resulting in the partial disassembly of the Cas1-Cas2 and protospacer complex, as demonstrated by electrophoretic mobility shift assay. Our study focuses on this mechanism of spacer acquisition inhibition and provides insights into the biology of CRISPR-Cas systems.https://doi.org/10.1038/s41467-024-47713-7
spellingShingle Mingfang Bi
Wenjing Su
Jiafu Li
Xiaobing Mo
Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5
Nature Communications
title Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5
title_full Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5
title_fullStr Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5
title_full_unstemmed Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5
title_short Insights into the inhibition of protospacer integration via direct interaction between Cas2 and AcrVA5
title_sort insights into the inhibition of protospacer integration via direct interaction between cas2 and acrva5
url https://doi.org/10.1038/s41467-024-47713-7
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