Diversity of Endonuclease V: From DNA Repair to RNA Editing

Deamination of adenine occurs in DNA, RNA, and their precursors via a hydrolytic reaction and a nitrosative reaction. The generated deaminated products are potentially mutagenic because of their structural similarity to natural bases, which in turn leads to erroneous nucleotide pairing and subsequen...

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Main Author: Isao Kuraoka
Format: Article
Language:English
Published: MDPI AG 2015-09-01
Series:Biomolecules
Subjects:
Online Access:http://www.mdpi.com/2218-273X/5/4/2194
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author Isao Kuraoka
author_facet Isao Kuraoka
author_sort Isao Kuraoka
collection DOAJ
description Deamination of adenine occurs in DNA, RNA, and their precursors via a hydrolytic reaction and a nitrosative reaction. The generated deaminated products are potentially mutagenic because of their structural similarity to natural bases, which in turn leads to erroneous nucleotide pairing and subsequent disruption of cellular metabolism. Incorporation of deaminated precursors into the nucleic acid strand occurs during nucleotide synthesis by DNA and RNA polymerases or base modification by DNA- and/or RNA-editing enzymes during cellular functions. In such cases, removal of deaminated products from DNA and RNA by a nuclease might be required depending on the cellular function. One such enzyme, endonuclease V, recognizes deoxyinosine and cleaves 3' end of the damaged base in double-stranded DNA through an alternative excision repair mechanism in Escherichia coli, whereas in Homo sapiens, it recognizes and cleaves inosine in single-stranded RNA. However, to explore the role of endonuclease V in vivo, a detailed analysis of cell biology is required. Based on recent reports and developments on endonuclease V, we discuss the potential functions of endonuclease V in DNA repair and RNA metabolism.
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spelling doaj.art-d2c8b1957a9446d0bb22c762bc4280452022-12-22T00:42:09ZengMDPI AGBiomolecules2218-273X2015-09-01542194220610.3390/biom5042194biom5042194Diversity of Endonuclease V: From DNA Repair to RNA EditingIsao Kuraoka0Division of Chemistry, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531, JapanDeamination of adenine occurs in DNA, RNA, and their precursors via a hydrolytic reaction and a nitrosative reaction. The generated deaminated products are potentially mutagenic because of their structural similarity to natural bases, which in turn leads to erroneous nucleotide pairing and subsequent disruption of cellular metabolism. Incorporation of deaminated precursors into the nucleic acid strand occurs during nucleotide synthesis by DNA and RNA polymerases or base modification by DNA- and/or RNA-editing enzymes during cellular functions. In such cases, removal of deaminated products from DNA and RNA by a nuclease might be required depending on the cellular function. One such enzyme, endonuclease V, recognizes deoxyinosine and cleaves 3' end of the damaged base in double-stranded DNA through an alternative excision repair mechanism in Escherichia coli, whereas in Homo sapiens, it recognizes and cleaves inosine in single-stranded RNA. However, to explore the role of endonuclease V in vivo, a detailed analysis of cell biology is required. Based on recent reports and developments on endonuclease V, we discuss the potential functions of endonuclease V in DNA repair and RNA metabolism.http://www.mdpi.com/2218-273X/5/4/2194deaminationendonuclease VDNA repairRNA editing
spellingShingle Isao Kuraoka
Diversity of Endonuclease V: From DNA Repair to RNA Editing
Biomolecules
deamination
endonuclease V
DNA repair
RNA editing
title Diversity of Endonuclease V: From DNA Repair to RNA Editing
title_full Diversity of Endonuclease V: From DNA Repair to RNA Editing
title_fullStr Diversity of Endonuclease V: From DNA Repair to RNA Editing
title_full_unstemmed Diversity of Endonuclease V: From DNA Repair to RNA Editing
title_short Diversity of Endonuclease V: From DNA Repair to RNA Editing
title_sort diversity of endonuclease v from dna repair to rna editing
topic deamination
endonuclease V
DNA repair
RNA editing
url http://www.mdpi.com/2218-273X/5/4/2194
work_keys_str_mv AT isaokuraoka diversityofendonucleasevfromdnarepairtornaediting