The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China
The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) was mentioned in this research. By studying comparatively, we found that the C. pubipetala Y. Wan & S. Z. Huang chloroplast genome was 156,993 bp in length and composed of 86,5...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1915207 |
| _version_ | 1827772477989715968 |
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| author | Yuan-yuan Fan Xiao-xia Ye Min Wei Bo Li Yu-lin Zhu Zhou Xing-wen |
| author_facet | Yuan-yuan Fan Xiao-xia Ye Min Wei Bo Li Yu-lin Zhu Zhou Xing-wen |
| author_sort | Yuan-yuan Fan |
| collection | DOAJ |
| description | The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) was mentioned in this research. By studying comparatively, we found that the C. pubipetala Y. Wan & S. Z. Huang chloroplast genome was 156,993 bp in length and composed of 86,590 bp LSC, 18,211 bp SSC, and two reverse repeating regions with 26,090 bp. The whole GC content was 37.33%. The genome encoded 116 functional genes, including 80 protein-coding genes, 32 tRNA genes, and 4 rRNA genes. In order to find the phylogenetic relationship of C. pubipetala Y. Wan & S. Z. Huang within Camellia genus, we reconstructed phylogenetic tree. The results indicate that C. pubipetala Y. Wan & S. Z. Huang was closely related to Camellia huana voucher and Camellia ptilosperma. |
| first_indexed | 2024-03-11T13:10:04Z |
| format | Article |
| id | doaj.art-d36c0093144c41bdac59dff39044dd57 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:04Z |
| publishDate | 2021-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-d36c0093144c41bdac59dff39044dd572023-11-03T14:16:09ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-10-016102893289510.1080/23802359.2021.19152071915207The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South ChinaYuan-yuan Fan0Xiao-xia Ye1Min Wei2Bo Li3Yu-lin Zhu4Zhou Xing-wen5College of Pharmacy, Guilin Medical UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityGuangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Yulin Normal UniversityThe complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) was mentioned in this research. By studying comparatively, we found that the C. pubipetala Y. Wan & S. Z. Huang chloroplast genome was 156,993 bp in length and composed of 86,590 bp LSC, 18,211 bp SSC, and two reverse repeating regions with 26,090 bp. The whole GC content was 37.33%. The genome encoded 116 functional genes, including 80 protein-coding genes, 32 tRNA genes, and 4 rRNA genes. In order to find the phylogenetic relationship of C. pubipetala Y. Wan & S. Z. Huang within Camellia genus, we reconstructed phylogenetic tree. The results indicate that C. pubipetala Y. Wan & S. Z. Huang was closely related to Camellia huana voucher and Camellia ptilosperma.http://dx.doi.org/10.1080/23802359.2021.1915207camellia pubipetala y.wan & s.z.huang (theaceae)complete chloroplast genomephylogeny tree |
| spellingShingle | Yuan-yuan Fan Xiao-xia Ye Min Wei Bo Li Yu-lin Zhu Zhou Xing-wen The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China Mitochondrial DNA. Part B. Resources camellia pubipetala y.wan & s.z.huang (theaceae) complete chloroplast genome phylogeny tree |
| title | The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China |
| title_full | The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China |
| title_fullStr | The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China |
| title_full_unstemmed | The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China |
| title_short | The complete chloroplast genome sequence of rare and endangered Camellia pubipetala Y. Wan & S. Z. Huang (Theaceae) of South China |
| title_sort | complete chloroplast genome sequence of rare and endangered camellia pubipetala y wan s z huang theaceae of south china |
| topic | camellia pubipetala y.wan & s.z.huang (theaceae) complete chloroplast genome phylogeny tree |
| url | http://dx.doi.org/10.1080/23802359.2021.1915207 |
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