The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
Camellia gauchowensis is an economic woody edible oil tree species with high yield per unit area and high ornamental value, which is commonly cultivated in the south of China. The complete chloroplast (cp) genome of C. gauchowensis was assembled and annotated based on the Illumina pair-end sequencin...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1772694 |
| _version_ | 1827772877458374656 |
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| author | Yuanlan Zhang Guibin Wang |
| author_facet | Yuanlan Zhang Guibin Wang |
| author_sort | Yuanlan Zhang |
| collection | DOAJ |
| description | Camellia gauchowensis is an economic woody edible oil tree species with high yield per unit area and high ornamental value, which is commonly cultivated in the south of China. The complete chloroplast (cp) genome of C. gauchowensis was assembled and annotated based on the Illumina pair-end sequencing. The whole cp genome of C. gauchowensis is 157,004 bp in size and comprises of a large single-copy (LSC) region of 86,657 bp and a small single-copy (SSC) region of 18,297 bp separated by a pair of inverted repeat (IR) regions of 26,025 bp each. It encodes a total of 129 genes, including 81 protein-coding genes, 5 ribosomal RNA genes, and 43 transfer RNA genes. The neighbor-joining phylogenetic analysis shows that C. gauchowensis is evolutionarily closest to C. cuspidata. |
| first_indexed | 2024-03-11T13:14:06Z |
| format | Article |
| id | doaj.art-d3da4fcb8130436488dccef6cbb20cc2 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:06Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-d3da4fcb8130436488dccef6cbb20cc22023-11-03T13:50:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532299230010.1080/23802359.2020.17726941772694The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysisYuanlan Zhang0Guibin Wang1The Southern Modern Forestry Collaborative Innovation Center, Nanjing Forestry UniversityCollege of Forestry, Nanjing Forestry UniversityCamellia gauchowensis is an economic woody edible oil tree species with high yield per unit area and high ornamental value, which is commonly cultivated in the south of China. The complete chloroplast (cp) genome of C. gauchowensis was assembled and annotated based on the Illumina pair-end sequencing. The whole cp genome of C. gauchowensis is 157,004 bp in size and comprises of a large single-copy (LSC) region of 86,657 bp and a small single-copy (SSC) region of 18,297 bp separated by a pair of inverted repeat (IR) regions of 26,025 bp each. It encodes a total of 129 genes, including 81 protein-coding genes, 5 ribosomal RNA genes, and 43 transfer RNA genes. The neighbor-joining phylogenetic analysis shows that C. gauchowensis is evolutionarily closest to C. cuspidata.http://dx.doi.org/10.1080/23802359.2020.1772694camellia gauchowensischloroplast genomephylogenetic analysis |
| spellingShingle | Yuanlan Zhang Guibin Wang The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis Mitochondrial DNA. Part B. Resources camellia gauchowensis chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis |
| title_full | The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis |
| title_fullStr | The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis |
| title_full_unstemmed | The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis |
| title_short | The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis |
| title_sort | complete chloroplast genome of camellia gauchowensis and its phylogenetic analysis |
| topic | camellia gauchowensis chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1772694 |
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