Coupling Seq-BSA and RNA-Seq Analyses Reveal the Molecular Pathway and Genes Associated with Heading Type in Chinese Cabbage

Coupling Seq-BSA and RNA-Seq Analyses Reveal the Molecular Pathway and Genes Associated with Heading Type in Chinese Cabbage

In Chinese cabbage, heading type is a key agricultural trait of significant economic importance. Using a natural microspore-derived doubled haploid plant, we generated self-crossed progeny with overlapping or outward curling head morphotypes. Sequencing-based bulked segregant analysis (Seq-BSA) reve...

Full description

Bibliographic Details
Main Authors:	AiXia Gu, Chuan Meng, YueQi Chen, Lai Wei, Hui Dong, Yin Lu, YanHua Wang, XuePing Chen, JianJun Zhao, ShuXing Shen
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2017-12-01
Series:	Frontiers in Genetics
Subjects:	Chinese cabbage heading type plant hormone BrGH3.12 BrABF1 Seq-BSA
Online Access:	http://journal.frontiersin.org/article/10.3389/fgene.2017.00176/full

Similar Items

The AP2 Transcription Factor <i>BrSHINE3</i> Regulates Wax Accumulation in Nonheading Chinese Cabbage
by: Zhaoyan Huo, et al.
Published: (2022-11-01)

Integrating BSA-Seq with RNA-Seq Reveals a Novel Fasciated Ear5 Mutant in Maize
by: Pengshuai Yan, et al.
Published: (2023-01-01)

Identification of candidate genes associated with body weight in swimming crab (Portunus trituberculatus) according to conjunctive analyses of BSA-seq and RNA-seq
by: Baohua Duan, et al.
Published: (2023-10-01)

Identification of candidate genes controlling chilling tolerance of rice in the cold region at the booting stage by BSA-Seq and RNA-Seq
by: Zhenhua Guo, et al.
Published: (2020-11-01)

Conuping BSA-Seq and RNA-Seq Reveal the Molecular Pathway and Genes Associated with the Plant Height of Foxtail Millet (<i>Setaria italica</i>)
by: Yongbin Gao, et al.
Published: (2022-10-01)

Combined BSA-Seq Based Mapping and RNA-Seq Profiling Reveal Candidate Genes Associated with Plant Architecture in <i>Brassica napus</i>
by: Shenhua Ye, et al.
Published: (2022-02-01)

BSA-Seq for the Identification of Major Genes for EPN in Rice
by: Shen Shen, et al.
Published: (2023-10-01)

Mapping of a QTL associated with sucrose content in peanut kernels using BSA-seq
by: Junjia Guo, et al.
Published: (2023-01-01)

Exploration of Candidate Genes for Fiber Length in Gossypium mustelinum Based on BSA-seq
by: CHEN Qi, et al.
Published: (2021-12-01)

Combined BSA-Seq and RNA-Seq Reveal Genes Associated with the Visual Stay-Green of Maize (<i>Zea mays</i> L.)
by: Ran Zheng, et al.
Published: (2023-12-01)

Rapid Mining of Candidate Genes for Verticillium Wilt Resistance in Cotton Based on BSA-Seq Analysis
by: Yanli Cui, et al.
Published: (2021-10-01)

CHINESE CABBAGE BrMYB34.2 TRANSCRIPTION FACTOR REGULATES INDOLIC GLUCOSINOLATES BIOSYNTHESIS IN Arabidopsis
by: Ye Zhao, et al.
Published: (2020-02-01)

BrUFO positively regulates the infection of Chinese cabbage by Plasmodiophora brassicae
by: Bo Zhang, et al.
Published: (2023-03-01)

Transcriptome Analysis of Chinese Cabbage Provides Insights into the Basis of Understanding the Lignin Affected by Low Temperature
by: Yun Dai, et al.
Published: (2022-11-01)

Glucosinolates in Self-crossed Progenies of Monosomic Cabbage Alien Addition Lines in Chinese Cabbage
by: Gu Aixia, et al.
Published: (2015-09-01)

Comparative Transcriptome Analysis of Purple and Green Flowering Chinese Cabbage and Functional Analyses of <i>BrMYB114</i> Gene
by: Mei Fu, et al.
Published: (2023-09-01)

Analysis of the role of BrRPP1 gene in Chinese cabbage infected by Plasmodiophora brassicae
by: Wenjie Ge, et al.
Published: (2023-01-01)

Research Note: Combined analysis of BSA-seq based mapping and RNA-seq reveals candidate genes associated with sub-Columbian plumage in H line chickens
by: Ruiting Li, et al.
Published: (2023-06-01)

Mapping Cucumber Vein Yellowing Virus Resistance in Cucumber (Cucumis sativus L.) by Using BSA-seq Analysis
by: Marta Pujol, et al.
Published: (2019-12-01)

Identification of candidate gene for resistance to broomrape (Orobanche cumana) in sunflower by BSA-seq
by: Shengli Liu, et al.
Published: (2020-05-01)

Fine Mapping and Identification of a Candidate Gene for the Glossy Green Trait in Cabbage (<i>Brassica oleracea</i> var. <i>capitata</i>)
by: Peiwen Wang, et al.
Published: (2023-09-01)

QTL mapping and BSA-seq map a major QTL for the node of the first fruiting branch in cotton
by: Xiaoyun Jia, et al.
Published: (2023-01-01)

Identification of a Branch Number Locus in Soybean Using BSA-Seq and GWAS Approaches
by: Dongqing Dai, et al.
Published: (2024-01-01)

BSA-Seq Approach Identified Candidate Region and Diagnostic Marker for Chilling Tolerance of High Oleic Acid Peanut at Germination Stage
by: Hongxi Sun, et al.
Published: (2022-12-01)

Identification of a major QTL and candidate genes analysis for branch angle in rapeseed (Brassica napus L.) using QTL-seq and RNA-seq
by: Shaolin Lei, et al.
Published: (2024-02-01)

Conjunctive Analyses of BSA-Seq and BSR-Seq Unveil the <i>Msβ-GAL</i> and <i>MsJMT</i> as Key Candidate Genes for Cytoplasmic Male Sterility in Alfalfa (<i>Medicago sativa</i> L.)
by: Le Zhou, et al.
Published: (2022-06-01)

The R3-Type MYB Transcription Factor BrMYBL2.1 Negatively Regulates Anthocyanin Biosynthesis in Chinese Cabbage (<i>Brassica rapa</i> L.) by Repressing MYB–bHLH–WD40 Complex Activity
by: JiYeon Kim, et al.
Published: (2022-03-01)

<p align="justify">Diversidade de Gênero e Formação do Endogrupo: uma contribuição da teoria da troca entre líder e membro (LMX)<br><br>Diversity of Gender and Formation of Ingroup: a contribution of leader-member exchange theory – LMX<br><br>Diversidad de Género y Formacion de Endogrupo: una contribuición de la leader-member exchange theory - LMX</p>
by: SILVA, Adilson Aderito da, et al.
Published: (2007-05-01)

<p align="justify">O Ressurgimento do Movimento Cooperativista de Trabalho no Brasil<br><br>The resurgence of the Cooperative Movement of Labor in Brazil<br><br>El Resurgimiento del Movimiento Cooperativista de Trabajo en Brasil</p>
by: CRISTOFOLI, Fulvio, et al.
Published: (2004-05-01)

Exploring the Regulatory Dynamics of <i>BrFLC</i>-Associated lncRNA in Modulating the Flowering Response of Chinese Cabbage
by: Yun Dai, et al.
Published: (2024-02-01)

Expression Analyses of ABCDE Model Genes and Changes in Levels of Endogenous Hormones in Chinese Cabbage Exhibiting Petal-Loss
by: Chuan MENG, et al.
Published: (2017-07-01)

Bulk RNA-Seq Analysis Reveals Differentially Expressed Genes Associated with Lateral Branch Angle in Peanut
by: Naveed Ahmad, et al.
Published: (2022-05-01)

Characteristics of Color Development in Seeds of Brown- and Yellow-Seeded Heading Chinese Cabbage and Molecular Analysis of Brsc, the Candidate Gene Controlling Seed Coat Color
by: Yanjing Ren, et al.
Published: (2017-08-01)

Mapping of a novel clubroot resistance QTL using ddRAD-seq in Chinese cabbage (Brassica rapa L.)
by: Rawnak Laila, et al.
Published: (2019-01-01)

Efficacy of a bendamustine and rituximab combination in first-line therapy for chronic lymphocytic leukemia: Results of the BEN-001 study
by: E A Stadnik, et al.
Published: (2017-07-01)

BSA-Seq and Fine Linkage Mapping for the Identification of a Novel Locus (qPH9) for Mature Plant Height in Rice (Oryza sativa)
by: Wei Xin, et al.
Published: (2022-05-01)

Identification of Salt Tolerance Related Candidate Genes in ‘Sea Rice 86’ at the Seedling and Reproductive Stages Using QTL-Seq and BSA-Seq
by: Qinmei Gao, et al.
Published: (2023-02-01)

<p align="justify">Estratégia de Diferenciação no Mercado Brasileiro de Café<br><br>Differentiation Strategy in the Brazilian Coffee Market<br><br>Estrategia de Diferenciación en el Mercado Brasileño del Café</p>
by: SILVA, Christian Luiz da, et al.
Published: (2006-05-01)

<p align="justify">Avaliação do Perfil de Empreendedores utilizando a Teoria de Tipos Psicológicos<br><br>Entrepreneuship Profile Evaluation using the Meaning of Psycological Types<br><br>Evaluación de los Perfis de los Emprendedores pelo uso de los Tipos Psicológicos</p>
by: VENTURA, Vera Lúcia da Silva, et al.
Published: (2007-05-01)

The cross and the crescent: the rise of American evangelicalism and the future of Muslims. Muhammad Arif Zakaullah / Kuala Lumpur: The Other Press, 2004; 269 pages)
by: Zain, Ibrahim Mohamed
Published: (2006)