Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images

Reconstruction, post-processing and visualization of images are important parts of magnetic resonance imaging (MRI). In this work, a new open source framework, namely Yet Another Pipeline (YAP), was proposed for reconstruction, post-processing and visualization of MR images. With YAP, researchers ca...

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Main Authors: LUO Qing, ZHANG Cheng-xiu, LI Wen-jing, ZHENG Hui, XIE Hai-bin, YANG Guang
Format: Article
Language:zho
Published: Science Press 2018-03-01
Series:Chinese Journal of Magnetic Resonance
Subjects:
Online Access:http://121.43.60.238/bpxzz/EN/10.11938/cjmr20172588
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author LUO Qing
ZHANG Cheng-xiu
LI Wen-jing
ZHENG Hui
XIE Hai-bin
YANG Guang
author_facet LUO Qing
ZHANG Cheng-xiu
LI Wen-jing
ZHENG Hui
XIE Hai-bin
YANG Guang
author_sort LUO Qing
collection DOAJ
description Reconstruction, post-processing and visualization of images are important parts of magnetic resonance imaging (MRI). In this work, a new open source framework, namely Yet Another Pipeline (YAP), was proposed for reconstruction, post-processing and visualization of MR images. With YAP, researchers can build customized image-processing pipelines with ease. Compared with the existing open source frameworks, YAP has the following features: (1) it has an interface-based design, enabling function extension by plugin development; (2) it uses a script language with straightforward grammar, making it easy to build and modify customized pipelines; (3) it supports branches in the pipelines, facilitating pipeline building and debugging. YAP has been implemented on a commercial MRI system.
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spelling doaj.art-d62ed88d31e6486ebd678cfd83e18d4c2022-12-21T23:26:26ZzhoScience PressChinese Journal of Magnetic Resonance1000-45561000-45562018-03-01351405110.11938/cjmr20172588Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance ImagesLUO Qing0ZHANG Cheng-xiu1 LI Wen-jing2 ZHENG Hui3XIE Hai-bin4YANG Guang5Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, ChinaShanghai Colorful Magnetic Resonance Technology Corporation Limited, Shanghai 201614, ChinaShanghai Niumag Electronic Technology Corporation, Shanghai 200333, ChinaShanghai Colorful Magnetic Resonance Technology Corporation Limited, Shanghai 201614, China1. Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, China; 2. Shanghai Colorful Magnetic Resonance Technology Corporation Limited, Shanghai 201614, China1. Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, China; 2. Shanghai Colorful Magnetic Resonance Technology Corporation Limited, Shanghai 201614, ChinaReconstruction, post-processing and visualization of images are important parts of magnetic resonance imaging (MRI). In this work, a new open source framework, namely Yet Another Pipeline (YAP), was proposed for reconstruction, post-processing and visualization of MR images. With YAP, researchers can build customized image-processing pipelines with ease. Compared with the existing open source frameworks, YAP has the following features: (1) it has an interface-based design, enabling function extension by plugin development; (2) it uses a script language with straightforward grammar, making it easy to build and modify customized pipelines; (3) it supports branches in the pipelines, facilitating pipeline building and debugging. YAP has been implemented on a commercial MRI system.http://121.43.60.238/bpxzz/EN/10.11938/cjmr20172588magnetic resonance imaging (MRI)processing pipelineYet Another Pipeline (YAP)open sourcemedical image processingcompressed sensing (CS)
spellingShingle LUO Qing
ZHANG Cheng-xiu
LI Wen-jing
ZHENG Hui
XIE Hai-bin
YANG Guang
Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images
Chinese Journal of Magnetic Resonance
magnetic resonance imaging (MRI)
processing pipeline
Yet Another Pipeline (YAP)
open source
medical image processing
compressed sensing (CS)
title Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images
title_full Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images
title_fullStr Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images
title_full_unstemmed Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images
title_short Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images
title_sort design and implementation of a novel processing pipeline for magnetic resonance images
topic magnetic resonance imaging (MRI)
processing pipeline
Yet Another Pipeline (YAP)
open source
medical image processing
compressed sensing (CS)
url http://121.43.60.238/bpxzz/EN/10.11938/cjmr20172588
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AT zhangchengxiu designandimplementationofanovelprocessingpipelineformagneticresonanceimages
AT liwenjing designandimplementationofanovelprocessingpipelineformagneticresonanceimages
AT zhenghui designandimplementationofanovelprocessingpipelineformagneticresonanceimages
AT xiehaibin designandimplementationofanovelprocessingpipelineformagneticresonanceimages
AT yangguang designandimplementationofanovelprocessingpipelineformagneticresonanceimages