Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests

Automatic tree crown segmentation from remote sensing data is especially challenging in dense, diverse, and multilayered tropical forest canopies, and tracking mortality by this approach is even more difficult. Here, we examine the potential for combining airborne laser scanning (ALS) with multispec...

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Main Authors: Melaine Aubry-Kientz, Anthony Laybros, Ben Weinstein, James Ball, Toby Jackson, David Coomes, Gregoire Vincent
Format: Article
Language:English
Published: IEEE 2021-01-01
Series:IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing
Subjects:
Online Access:https://ieeexplore.ieee.org/document/9387530/
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author Melaine Aubry-Kientz
Anthony Laybros
Ben Weinstein
James Ball
Toby Jackson
David Coomes
Gregoire Vincent
author_facet Melaine Aubry-Kientz
Anthony Laybros
Ben Weinstein
James Ball
Toby Jackson
David Coomes
Gregoire Vincent
author_sort Melaine Aubry-Kientz
collection DOAJ
description Automatic tree crown segmentation from remote sensing data is especially challenging in dense, diverse, and multilayered tropical forest canopies, and tracking mortality by this approach is even more difficult. Here, we examine the potential for combining airborne laser scanning (ALS) with multispectral and hyperspectral data to improve the accuracy of tree crown segmentation at a study site in French Guiana. We combined an ALS point cloud clustering method with a spectral deep learning model to achieve 83% accuracy at recognizing manually segmented reference crowns (with congruence >0.5). This method outperformed a two-step process that involved clustering the ALS point cloud and then using the logistic regression of hyperspectral distances to correct oversegmentation. We used this approach to map tree mortality from repeat surveys and show that the number of crowns identified in the first that intersected with height loss clusters was a good estimator of the number of dead trees in these areas. Our results demonstrate that multisensor data fusion improves the automatic segmentation of individual tree crowns and presents a promising avenue to study forest demography with repeated remote sensing acquisitions.
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spelling doaj.art-d64d54fa2f0544dba4d3794bc754cdf82022-12-21T22:42:20ZengIEEEIEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing2151-15352021-01-01143927393610.1109/JSTARS.2021.30691599387530Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical ForestsMelaine Aubry-Kientz0https://orcid.org/0000-0002-4439-8626Anthony Laybros1https://orcid.org/0000-0002-5111-5225Ben Weinstein2James Ball3Toby Jackson4David Coomes5https://orcid.org/0000-0002-8261-2582Gregoire Vincent6AgroParisTech, UMR EcoFoG (CNRS, Cirad, INRAE, Université des Antilles, Université de la Guyane), Kourou, French GuianaAMAP, University of Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, FranceDepartment of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL, USADepartment of Plant Sciences, University of Cambridge, Cambridge, U.K.Department of Plant Sciences, University of Cambridge, Cambridge, U.K.University of Cambridge Conservation Research Institute, Cambridge, U.K.AMAP, University of Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, FranceAutomatic tree crown segmentation from remote sensing data is especially challenging in dense, diverse, and multilayered tropical forest canopies, and tracking mortality by this approach is even more difficult. Here, we examine the potential for combining airborne laser scanning (ALS) with multispectral and hyperspectral data to improve the accuracy of tree crown segmentation at a study site in French Guiana. We combined an ALS point cloud clustering method with a spectral deep learning model to achieve 83% accuracy at recognizing manually segmented reference crowns (with congruence >0.5). This method outperformed a two-step process that involved clustering the ALS point cloud and then using the logistic regression of hyperspectral distances to correct oversegmentation. We used this approach to map tree mortality from repeat surveys and show that the number of crowns identified in the first that intersected with height loss clusters was a good estimator of the number of dead trees in these areas. Our results demonstrate that multisensor data fusion improves the automatic segmentation of individual tree crowns and presents a promising avenue to study forest demography with repeated remote sensing acquisitions.https://ieeexplore.ieee.org/document/9387530/Airborne laser scanning (ALS)data fusiondeepforesthigh-resolution imageryhyperspectral3-D adaptive mean-shift (AMS3D)
spellingShingle Melaine Aubry-Kientz
Anthony Laybros
Ben Weinstein
James Ball
Toby Jackson
David Coomes
Gregoire Vincent
Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests
IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing
Airborne laser scanning (ALS)
data fusion
deepforest
high-resolution imagery
hyperspectral
3-D adaptive mean-shift (AMS3D)
title Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests
title_full Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests
title_fullStr Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests
title_full_unstemmed Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests
title_short Multisensor Data Fusion for Improved Segmentation of Individual Tree Crowns in Dense Tropical Forests
title_sort multisensor data fusion for improved segmentation of individual tree crowns in dense tropical forests
topic Airborne laser scanning (ALS)
data fusion
deepforest
high-resolution imagery
hyperspectral
3-D adaptive mean-shift (AMS3D)
url https://ieeexplore.ieee.org/document/9387530/
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