Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea

Legumes play an important role in ensuring food security, improving nutrition and enhancing ecosystem resilience. Chickpea is a globally important grain legume adapted to semi-arid regions under rain-fed conditions. A growing body of research shows that aldehyde dehydrogenases (ALDHs) represent a ge...

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Main Authors: Rocío Carmona-Molero, Jose C. Jimenez-Lopez, Cristina Caballo, Juan Gil, Teresa Millán, Jose V. Die
Format: Article
Language:English
Published: MDPI AG 2021-11-01
Series:Plants
Subjects:
Online Access:https://www.mdpi.com/2223-7747/10/11/2429
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author Rocío Carmona-Molero
Jose C. Jimenez-Lopez
Cristina Caballo
Juan Gil
Teresa Millán
Jose V. Die
author_facet Rocío Carmona-Molero
Jose C. Jimenez-Lopez
Cristina Caballo
Juan Gil
Teresa Millán
Jose V. Die
author_sort Rocío Carmona-Molero
collection DOAJ
description Legumes play an important role in ensuring food security, improving nutrition and enhancing ecosystem resilience. Chickpea is a globally important grain legume adapted to semi-arid regions under rain-fed conditions. A growing body of research shows that aldehyde dehydrogenases (ALDHs) represent a gene class with promising potential for plant adaptation improvement. Aldehyde dehydrogenases constitute a superfamily of proteins with important functions as ‘aldehyde scavengers’ by detoxifying aldehydes molecules, and thus play important roles in stress responses. We performed a comprehensive study of the ALDH superfamily in the chickpea genome and identified 27 unique ALDH <i>loci</i>. Most chickpea ALDHs originated from duplication events and the ALDH3 gene family was noticeably expanded. Based on the physical locations of genes and sequence similarities, our results suggest that segmental duplication is a major driving force in the expansion of the ALDH family. Supported by expression data, the findings of this study offer new potential target genes for improving stress tolerance in chickpea that will be useful for breeding programs.
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spelling doaj.art-d6bb8b32cef447af9667fe9d70cc96502023-11-23T01:05:33ZengMDPI AGPlants2223-77472021-11-011011242910.3390/plants10112429Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in ChickpeaRocío Carmona-Molero0Jose C. Jimenez-Lopez1Cristina Caballo2Juan Gil3Teresa Millán4Jose V. Die5Department of Genetics ETSIAM, University of Córdoba, 14071 Córdoba, SpainDepartment of Biochemistry, Cell and Molecular Biology of Plants, EEZ-CSIC, 18008 Granada, SpainÁrea de Genómica y Biotecnología, IFAPA, Alameda del Obispo, 14080 Córdoba, SpainDepartment of Genetics ETSIAM, University of Córdoba, 14071 Córdoba, SpainDepartment of Genetics ETSIAM, University of Córdoba, 14071 Córdoba, SpainDepartment of Genetics ETSIAM, University of Córdoba, 14071 Córdoba, SpainLegumes play an important role in ensuring food security, improving nutrition and enhancing ecosystem resilience. Chickpea is a globally important grain legume adapted to semi-arid regions under rain-fed conditions. A growing body of research shows that aldehyde dehydrogenases (ALDHs) represent a gene class with promising potential for plant adaptation improvement. Aldehyde dehydrogenases constitute a superfamily of proteins with important functions as ‘aldehyde scavengers’ by detoxifying aldehydes molecules, and thus play important roles in stress responses. We performed a comprehensive study of the ALDH superfamily in the chickpea genome and identified 27 unique ALDH <i>loci</i>. Most chickpea ALDHs originated from duplication events and the ALDH3 gene family was noticeably expanded. Based on the physical locations of genes and sequence similarities, our results suggest that segmental duplication is a major driving force in the expansion of the ALDH family. Supported by expression data, the findings of this study offer new potential target genes for improving stress tolerance in chickpea that will be useful for breeding programs.https://www.mdpi.com/2223-7747/10/11/2429abiotic stressALDHchickpeaESTlegumes<i>Fusarium</i>
spellingShingle Rocío Carmona-Molero
Jose C. Jimenez-Lopez
Cristina Caballo
Juan Gil
Teresa Millán
Jose V. Die
Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea
Plants
abiotic stress
ALDH
chickpea
EST
legumes
<i>Fusarium</i>
title Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea
title_full Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea
title_fullStr Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea
title_full_unstemmed Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea
title_short Aldehyde Dehydrogenase 3 Is an Expanded Gene Family with Potential Adaptive Roles in Chickpea
title_sort aldehyde dehydrogenase 3 is an expanded gene family with potential adaptive roles in chickpea
topic abiotic stress
ALDH
chickpea
EST
legumes
<i>Fusarium</i>
url https://www.mdpi.com/2223-7747/10/11/2429
work_keys_str_mv AT rociocarmonamolero aldehydedehydrogenase3isanexpandedgenefamilywithpotentialadaptiverolesinchickpea
AT josecjimenezlopez aldehydedehydrogenase3isanexpandedgenefamilywithpotentialadaptiverolesinchickpea
AT cristinacaballo aldehydedehydrogenase3isanexpandedgenefamilywithpotentialadaptiverolesinchickpea
AT juangil aldehydedehydrogenase3isanexpandedgenefamilywithpotentialadaptiverolesinchickpea
AT teresamillan aldehydedehydrogenase3isanexpandedgenefamilywithpotentialadaptiverolesinchickpea
AT josevdie aldehydedehydrogenase3isanexpandedgenefamilywithpotentialadaptiverolesinchickpea