The complete chloroplast genome of Cnidium officinale Makino
Cnidium officinale (Ligusticum officinale) is an important herbal medicine. To facilitate species identification, we determined the complete chloroplast genome of C. officinale using the Illumina MiSeq platform. The genome was 148,518 bp in length, comprising a large single copy (LSC) region of 93,9...
| Main Authors: | , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2018-07-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1464413 |
| _version_ | 1797640721775198208 |
|---|---|
| author | Inkyu Park Sungyu Yang Wook Jin Kim Pureum Noh Hyun Oh Lee Byeong Cheol Moon |
| author_facet | Inkyu Park Sungyu Yang Wook Jin Kim Pureum Noh Hyun Oh Lee Byeong Cheol Moon |
| author_sort | Inkyu Park |
| collection | DOAJ |
| description | Cnidium officinale (Ligusticum officinale) is an important herbal medicine. To facilitate species identification, we determined the complete chloroplast genome of C. officinale using the Illumina MiSeq platform. The genome was 148,518 bp in length, comprising a large single copy (LSC) region of 93,977 bp, a small single copy (SSC) region of 17,607 bp, and two inverted repeat regions (IRa and IRb) of 18,467 bp each. The genome contains 113 unique genes, including 79 protein-coding genes, four ribosomal RNAs (rRNAs), and 30 transfer RNAs (tRNAs). Phylogenetic analysis revealed that C. officinale is most closely related to L. tenuissium, with high bootstrap values. |
| first_indexed | 2024-03-11T13:35:48Z |
| format | Article |
| id | doaj.art-d827fb1609864cc69a4ae31916715c6f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:35:48Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-d827fb1609864cc69a4ae31916715c6f2023-11-02T15:57:23ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013249049110.1080/23802359.2018.14644131464413The complete chloroplast genome of Cnidium officinale MakinoInkyu Park0Sungyu Yang1Wook Jin Kim2Pureum Noh3Hyun Oh Lee4Byeong Cheol Moon5K-herb Research Center, Korea Institute of Oriental MedicineK-herb Research Center, Korea Institute of Oriental MedicineK-herb Research Center, Korea Institute of Oriental MedicineK-herb Research Center, Korea Institute of Oriental MedicinePhyzen Genomics InstituteK-herb Research Center, Korea Institute of Oriental MedicineCnidium officinale (Ligusticum officinale) is an important herbal medicine. To facilitate species identification, we determined the complete chloroplast genome of C. officinale using the Illumina MiSeq platform. The genome was 148,518 bp in length, comprising a large single copy (LSC) region of 93,977 bp, a small single copy (SSC) region of 17,607 bp, and two inverted repeat regions (IRa and IRb) of 18,467 bp each. The genome contains 113 unique genes, including 79 protein-coding genes, four ribosomal RNAs (rRNAs), and 30 transfer RNAs (tRNAs). Phylogenetic analysis revealed that C. officinale is most closely related to L. tenuissium, with high bootstrap values.http://dx.doi.org/10.1080/23802359.2018.1464413cnidium officinaleligusticum officinalemedicinal plantchloroplast genome apiaceae |
| spellingShingle | Inkyu Park Sungyu Yang Wook Jin Kim Pureum Noh Hyun Oh Lee Byeong Cheol Moon The complete chloroplast genome of Cnidium officinale Makino Mitochondrial DNA. Part B. Resources cnidium officinale ligusticum officinale medicinal plant chloroplast genome apiaceae |
| title | The complete chloroplast genome of Cnidium officinale Makino |
| title_full | The complete chloroplast genome of Cnidium officinale Makino |
| title_fullStr | The complete chloroplast genome of Cnidium officinale Makino |
| title_full_unstemmed | The complete chloroplast genome of Cnidium officinale Makino |
| title_short | The complete chloroplast genome of Cnidium officinale Makino |
| title_sort | complete chloroplast genome of cnidium officinale makino |
| topic | cnidium officinale ligusticum officinale medicinal plant chloroplast genome apiaceae |
| url | http://dx.doi.org/10.1080/23802359.2018.1464413 |
| work_keys_str_mv | AT inkyupark thecompletechloroplastgenomeofcnidiumofficinalemakino AT sungyuyang thecompletechloroplastgenomeofcnidiumofficinalemakino AT wookjinkim thecompletechloroplastgenomeofcnidiumofficinalemakino AT pureumnoh thecompletechloroplastgenomeofcnidiumofficinalemakino AT hyunohlee thecompletechloroplastgenomeofcnidiumofficinalemakino AT byeongcheolmoon thecompletechloroplastgenomeofcnidiumofficinalemakino AT inkyupark completechloroplastgenomeofcnidiumofficinalemakino AT sungyuyang completechloroplastgenomeofcnidiumofficinalemakino AT wookjinkim completechloroplastgenomeofcnidiumofficinalemakino AT pureumnoh completechloroplastgenomeofcnidiumofficinalemakino AT hyunohlee completechloroplastgenomeofcnidiumofficinalemakino AT byeongcheolmoon completechloroplastgenomeofcnidiumofficinalemakino |