Alignment-free phylogeny of whole genomes using underlying subwords
<p>Abstract</p> <p>Background</p> <p>With the progress of modern sequencing technologies a large number of complete genomes are now available. Traditionally the comparison of two related genomes is carried out by sequence alignment. There are cases where these technique...
Main Authors: | Comin Matteo, Verzotto Davide |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2012-12-01
|
Series: | Algorithms for Molecular Biology |
Subjects: | |
Online Access: | http://www.almob.org/content/7/1/34 |
Similar Items
-
An alignment-free heuristic for fast sequence comparisons with applications to phylogeny reconstruction
by: Sriram P. Chockalingam, et al.
Published: (2020-11-01) -
CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy
by: Guanghong Zuo, et al.
Published: (2015-10-01) -
Filtering Degenerate Patterns with Application to Protein Sequence Analysis
by: Matteo Comin, et al.
Published: (2013-05-01) -
CAM: an alignment-free method to recover phylogenies using codon aversion motifs
by: Justin B. Miller, et al.
Published: (2019-06-01) -
Alignment-Free Analysis of Whole-Genome Sequences From Symbiodiniaceae Reveals Different Phylogenetic Signals in Distinct Regions
by: Rosalyn Lo, et al.
Published: (2022-04-01)