Genome Sequencing of <i>Streptomyces griseus</i> SCSIO PteL053, the Producer of 2,2′-Bipyridine and Actinomycin Analogs, and Associated Biosynthetic Gene Cluster Analysis

Marine symbiotic actinomycetes play a key role in drug development and their ecological niches can influence a variety of natural product biosynthesis, providing potential defensive benefits. In this study, we report the whole-genome sequence analysis of marine gastropod mollusk <i>Planaxis<...

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Bibliographic Details
Main Authors: Ganesan Govindarajan, Ziwei Yao, Zhenbin Zhou, Xiaohong Zheng, Junying Ma, Pachaiyappan Saravana Kumar, Jianhua Ju, Changli Sun
Format: Article
Language:English
Published: MDPI AG 2023-02-01
Series:Journal of Marine Science and Engineering
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Online Access:https://www.mdpi.com/2077-1312/11/2/396
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Summary:Marine symbiotic actinomycetes play a key role in drug development and their ecological niches can influence a variety of natural product biosynthesis, providing potential defensive benefits. In this study, we report the whole-genome sequence analysis of marine gastropod mollusk <i>Planaxis</i> sp.-associated <i>Streptomyces griseus</i> SCSIO PteL053, which harbors 28 putative biosynthetic gene clusters (BGCs). Among them, two BGCs encoded by a hybrid non-ribosomal peptide (NRPS)/polyketide (PKS) synthetase and non-ribosomal peptide synthetase (NRPS) are responsible for the synthesis of the known therapeutic metabolites 2,2′-bipyridine and actinomycin analogs, respectively. Detailed bioinformatics analysis revealed the putative BGCs and the functions of the involved genes in the biosynthesis of the known compounds SF2738D (<b>1</b>), SF2738F (<b>2</b>), actinomycin D (<b>3</b>), and Actinomycin X<sub>oβ</sub> (<b>4</b>). In the present study, complete-genome sequencing allowed us to rediscover known, clinically useful secondary metabolites in the newly isolated <i>Streptomyces griseus</i> SCSIO PteL053.
ISSN:2077-1312