The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.

Allergic and autoimmune diseases had been attributed to lack of exposure to biodiversity, an important factor in regulating immune homeostasis in a healthy host. We posit that the microbiome of healthy dairy farmers (DF) will be richer than non-farmers (NF) living in urban settings due to exposure t...

Full description

Bibliographic Details
Main Authors: Sanjay K Shukla, Zhan Ye, Scott Sandberg, Iris Reyes, Thomas R Fritsche, Matthew Keifer
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2017-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5574581?pdf=render
_version_ 1819072437101264896
author Sanjay K Shukla
Zhan Ye
Scott Sandberg
Iris Reyes
Thomas R Fritsche
Matthew Keifer
author_facet Sanjay K Shukla
Zhan Ye
Scott Sandberg
Iris Reyes
Thomas R Fritsche
Matthew Keifer
author_sort Sanjay K Shukla
collection DOAJ
description Allergic and autoimmune diseases had been attributed to lack of exposure to biodiversity, an important factor in regulating immune homeostasis in a healthy host. We posit that the microbiome of healthy dairy farmers (DF) will be richer than non-farmers (NF) living in urban settings due to exposure to a greater biodiversity in the dairy environment. However, no studies have investigated the relationships between microbiota of dairy farmers (DF) compared with urban non-farmers (NF). We compared the nasal and oral microbiota of dairy farmers (N_DF, O_DF, respectively) with nasal and oral microbiota of NF in the same geographical area. The N_DF showed high microbial diversity with hundreds of unique genera that reflected environmental/occupational exposures. The nasal and oral microbiomes clustered separately from each other using Principal Coordinate Analysis, and with DF harboring two-fold and 1.5-fold greater exclusive genera in their nose and mouth respectively, than did non-farmers. Additionally, the N_DF group had a lower burden of Staphylococcus spp. suggesting a correlation between higher microbial diversity and competition for colonization by staphylococci. The N_DF samples were negative for the mecA gene, a marker of methicillin-resistance in staphylococci. The lower burden of staphylococci was found to be independent of the abundance of Corynebacterium spp. Exposure to greater biodiversity could enhance microbial competition, thereby reducing colonization with opportunistic pathogens. Future studies will analyze whether exposure to livestock microbiomes offers protection from acute and chronic diseases.
first_indexed 2024-12-21T17:37:42Z
format Article
id doaj.art-d99078d5e9734db69a043ca3c03ef267
institution Directory Open Access Journal
issn 1932-6203
language English
last_indexed 2024-12-21T17:37:42Z
publishDate 2017-01-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS ONE
spelling doaj.art-d99078d5e9734db69a043ca3c03ef2672022-12-21T18:55:43ZengPublic Library of Science (PLoS)PLoS ONE1932-62032017-01-01128e018389810.1371/journal.pone.0183898The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.Sanjay K ShuklaZhan YeScott SandbergIris ReyesThomas R FritscheMatthew KeiferAllergic and autoimmune diseases had been attributed to lack of exposure to biodiversity, an important factor in regulating immune homeostasis in a healthy host. We posit that the microbiome of healthy dairy farmers (DF) will be richer than non-farmers (NF) living in urban settings due to exposure to a greater biodiversity in the dairy environment. However, no studies have investigated the relationships between microbiota of dairy farmers (DF) compared with urban non-farmers (NF). We compared the nasal and oral microbiota of dairy farmers (N_DF, O_DF, respectively) with nasal and oral microbiota of NF in the same geographical area. The N_DF showed high microbial diversity with hundreds of unique genera that reflected environmental/occupational exposures. The nasal and oral microbiomes clustered separately from each other using Principal Coordinate Analysis, and with DF harboring two-fold and 1.5-fold greater exclusive genera in their nose and mouth respectively, than did non-farmers. Additionally, the N_DF group had a lower burden of Staphylococcus spp. suggesting a correlation between higher microbial diversity and competition for colonization by staphylococci. The N_DF samples were negative for the mecA gene, a marker of methicillin-resistance in staphylococci. The lower burden of staphylococci was found to be independent of the abundance of Corynebacterium spp. Exposure to greater biodiversity could enhance microbial competition, thereby reducing colonization with opportunistic pathogens. Future studies will analyze whether exposure to livestock microbiomes offers protection from acute and chronic diseases.http://europepmc.org/articles/PMC5574581?pdf=render
spellingShingle Sanjay K Shukla
Zhan Ye
Scott Sandberg
Iris Reyes
Thomas R Fritsche
Matthew Keifer
The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.
PLoS ONE
title The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.
title_full The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.
title_fullStr The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.
title_full_unstemmed The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.
title_short The nasal microbiota of dairy farmers is more complex than oral microbiota, reflects occupational exposure, and provides competition for staphylococci.
title_sort nasal microbiota of dairy farmers is more complex than oral microbiota reflects occupational exposure and provides competition for staphylococci
url http://europepmc.org/articles/PMC5574581?pdf=render
work_keys_str_mv AT sanjaykshukla thenasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT zhanye thenasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT scottsandberg thenasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT irisreyes thenasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT thomasrfritsche thenasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT matthewkeifer thenasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT sanjaykshukla nasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT zhanye nasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT scottsandberg nasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT irisreyes nasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT thomasrfritsche nasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci
AT matthewkeifer nasalmicrobiotaofdairyfarmersismorecomplexthanoralmicrobiotareflectsoccupationalexposureandprovidescompetitionforstaphylococci