Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)

Abstract Background The invasive and calamitous polyphagous pest Spodoptera frugiperda or commonly known as fall armyworm (FAW) poses serious menace to the global agricultural production. Owing to the revamped invasion of FAW in 2018 in India, present study was undertaken for precise assessment of i...

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Main Authors: Snigdha Samanta, Mritunjoy Barman, Himanshu Thakur, Swati Chakraborty, Gouranga Upadhyaya, Deepayan Roy, Amitava Banerjee, Arunava Samanta, Jayanta Tarafdar
Format: Article
Language:English
Published: BMC 2023-07-01
Series:BMC Biotechnology
Subjects:
Online Access:https://doi.org/10.1186/s12896-023-00786-6
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author Snigdha Samanta
Mritunjoy Barman
Himanshu Thakur
Swati Chakraborty
Gouranga Upadhyaya
Deepayan Roy
Amitava Banerjee
Arunava Samanta
Jayanta Tarafdar
author_facet Snigdha Samanta
Mritunjoy Barman
Himanshu Thakur
Swati Chakraborty
Gouranga Upadhyaya
Deepayan Roy
Amitava Banerjee
Arunava Samanta
Jayanta Tarafdar
author_sort Snigdha Samanta
collection DOAJ
description Abstract Background The invasive and calamitous polyphagous pest Spodoptera frugiperda or commonly known as fall armyworm (FAW) poses serious menace to the global agricultural production. Owing to the revamped invasion of FAW in 2018 in India, present study was undertaken for precise assessment of its genetic identity and pesticide resistance to aid in pest-management strategies. Results To evaluate the diversity in FAW population across Eastern India, mitochondrial COI sequences were used which revealed a low nucleotide diversity. Analysis of molecular variance indicated significant genetic variation between four global geographical FAW populations with lowest differentiation between India and Africa suggesting a present-day and shared origin of FAW. The study demonstrated existence of two different strains (‘R’ strain and ‘C’ strain) based on COI gene marker. However, discrepancies between COI marker and host plant association of FAW was observed. Characterization of Tpi gene revealed abundance of TpiCa1a followed by TpiCa2b and TpiR1a strains respectively. The FAW population showed higher susceptibility towards chlorantraniliprole and spinetoram than cypermethrin. Insecticide resistance genes depicted marked upregulation although with lot of variance. Chlorantraniliprole resistance ratio (RR) exhibited significant correlation with 1950 (Glutathione S-transferase, GST), 9131 (Cytochrome P450, CYP) and 9360 (CYP) genes, while spinetoram and cypermethrin RR was found to correlate with 1950 (GST) and 9360 (CYP) genes. Conclusion This study manifests Indian subcontinent as the potential new hotspot for the growth and distribution of FAW population that can be effectively controlled using chlorantraniliprole and spinetoram. This study also adds novel significant information on FAW population across Eastern India for developing a comprehensive pest management approach for S. frugiperda.
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spelling doaj.art-d9d42a1c814e4948aa1679113b14e4772023-07-09T11:17:28ZengBMCBMC Biotechnology1472-67502023-07-0123111510.1186/s12896-023-00786-6Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)Snigdha Samanta0Mritunjoy Barman1Himanshu Thakur2Swati Chakraborty3Gouranga Upadhyaya4Deepayan Roy5Amitava Banerjee6Arunava Samanta7Jayanta Tarafdar8Department of Agricultural Entomology, Bidhan Chandra Krishi ViswavidyalayaDepartment of Agricultural Entomology, Bidhan Chandra Krishi ViswavidyalayaDepartment of Entomology, C.S.K. Himachal Pradesh Krishi VishvavidyalayaDepartment of Plant Pathology, Bidhan Chandra Krishi ViswavidyalayaDepartment of Biological Sciences, Indian Institute of Science Education and Research KolkataSchool of Agriculture Science, GD Goenka UniversityDepartment of Agricultural Entomology, Bidhan Chandra Krishi ViswavidyalayaDepartment of Agricultural Entomology, Bidhan Chandra Krishi ViswavidyalayaDepartment of Plant Pathology, Bidhan Chandra Krishi ViswavidyalayaAbstract Background The invasive and calamitous polyphagous pest Spodoptera frugiperda or commonly known as fall armyworm (FAW) poses serious menace to the global agricultural production. Owing to the revamped invasion of FAW in 2018 in India, present study was undertaken for precise assessment of its genetic identity and pesticide resistance to aid in pest-management strategies. Results To evaluate the diversity in FAW population across Eastern India, mitochondrial COI sequences were used which revealed a low nucleotide diversity. Analysis of molecular variance indicated significant genetic variation between four global geographical FAW populations with lowest differentiation between India and Africa suggesting a present-day and shared origin of FAW. The study demonstrated existence of two different strains (‘R’ strain and ‘C’ strain) based on COI gene marker. However, discrepancies between COI marker and host plant association of FAW was observed. Characterization of Tpi gene revealed abundance of TpiCa1a followed by TpiCa2b and TpiR1a strains respectively. The FAW population showed higher susceptibility towards chlorantraniliprole and spinetoram than cypermethrin. Insecticide resistance genes depicted marked upregulation although with lot of variance. Chlorantraniliprole resistance ratio (RR) exhibited significant correlation with 1950 (Glutathione S-transferase, GST), 9131 (Cytochrome P450, CYP) and 9360 (CYP) genes, while spinetoram and cypermethrin RR was found to correlate with 1950 (GST) and 9360 (CYP) genes. Conclusion This study manifests Indian subcontinent as the potential new hotspot for the growth and distribution of FAW population that can be effectively controlled using chlorantraniliprole and spinetoram. This study also adds novel significant information on FAW population across Eastern India for developing a comprehensive pest management approach for S. frugiperda.https://doi.org/10.1186/s12896-023-00786-6Insecticide resistanceCOI markerGenetic diversityFall Armyworm
spellingShingle Snigdha Samanta
Mritunjoy Barman
Himanshu Thakur
Swati Chakraborty
Gouranga Upadhyaya
Deepayan Roy
Amitava Banerjee
Arunava Samanta
Jayanta Tarafdar
Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)
BMC Biotechnology
Insecticide resistance
COI marker
Genetic diversity
Fall Armyworm
title Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)
title_full Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)
title_fullStr Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)
title_full_unstemmed Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)
title_short Evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm (Spodoptera frugiperda)
title_sort evidence of population expansion and insecticide resistance mechanism in invasive fall armyworm spodoptera frugiperda
topic Insecticide resistance
COI marker
Genetic diversity
Fall Armyworm
url https://doi.org/10.1186/s12896-023-00786-6
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