Evaluating Plant Gene Models Using Machine Learning

Evaluating Plant Gene Models Using Machine Learning

Gene models are regions of the genome that can be transcribed into RNA and translated to proteins, or belong to a class of non-coding RNA genes. The prediction of gene models is a complex process that can be unreliable, leading to false positive annotations. To help support the calling of confident...

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Bibliographic Details
Main Authors: Shriprabha R. Upadhyaya, Philipp E. Bayer, Cassandria G. Tay Fernandez, Jakob Petereit, Jacqueline Batley, Mohammed Bennamoun, Farid Boussaid, David Edwards
Format: Article
Language:English
Published: MDPI AG 2022-06-01
Series:Plants
Subjects:
gene models
pea
machine learning
XGBoost
SHAP
Online Access:https://www.mdpi.com/2223-7747/11/12/1619

Internet

https://www.mdpi.com/2223-7747/11/12/1619

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