Oculus: faster sequence alignment by streaming read compression

Oculus: faster sequence alignment by streaming read compression

<p>Abstract</p> <p>Background</p> <p>Despite significant advancement in alignment algorithms, the exponential growth of nucleotide sequencing throughput threatens to outpace bioinformatic analysis. Computation may become the bottleneck of genome analysis if growing alig...

Descrición completa

Detalles Bibliográficos
Main Authors: Veeneman Brendan A, Iyer Matthew K, Chinnaiyan Arul M
Formato: Artigo
Idioma:English
Publicado: BMC 2012-11-01
Series:BMC Bioinformatics
Subjects:
DNA nucleotide sequence alignment streaming identity redundancy compression software algorithm
Acceso en liña:http://www.biomedcentral.com/1471-2105/13/297

Títulos similares

Títulos similares