The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae)
The complete mitogenome of Hyporhamphus quoyi was sequenced, which is a closed double-stranded circular molecule of 16,511 bp, and we analyzed the main features in terms of the genome organization, gene arrangement and codon usage. The overall base composition includes A(27.4%), T(26.0%), C(30.4%) a...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1532339 |
| _version_ | 1827774167341072384 |
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| author | Kehua Zhu Zhenming Lü Bingjian Liu Li Gong Lihua Jiang Liqin Liu |
| author_facet | Kehua Zhu Zhenming Lü Bingjian Liu Li Gong Lihua Jiang Liqin Liu |
| author_sort | Kehua Zhu |
| collection | DOAJ |
| description | The complete mitogenome of Hyporhamphus quoyi was sequenced, which is a closed double-stranded circular molecule of 16,511 bp, and we analyzed the main features in terms of the genome organization, gene arrangement and codon usage. The overall base composition includes A(27.4%), T(26.0%), C(30.4%) and G(16.2%). Moreover, the 13 protein-coding genes (PCGs) encode 3804 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have a complete stop codon, whereas Cytb ends with the incomplete stop codon represented as a single T. The phylogenetic tree based on the neighbor-Joining method was conducted to provide relationship within Beloniformes, based on 12 PCGs encoded by the heavy strand, the NJ tree demonstrated that H. quoyi has a closest relationship with Hyporhamphus intermedius, which could be a useful basis for propagation of this species. |
| first_indexed | 2024-03-11T13:34:49Z |
| format | Article |
| id | doaj.art-dc42a0a36a6d46fd9bf3b9cf3cae2d57 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:49Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-dc42a0a36a6d46fd9bf3b9cf3cae2d572023-11-02T15:57:27ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-01321235123610.1080/23802359.2018.15323391532339The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae)Kehua Zhu0Zhenming Lü1Bingjian Liu2Li Gong3Lihua Jiang4Liqin Liu5Zhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityThe complete mitogenome of Hyporhamphus quoyi was sequenced, which is a closed double-stranded circular molecule of 16,511 bp, and we analyzed the main features in terms of the genome organization, gene arrangement and codon usage. The overall base composition includes A(27.4%), T(26.0%), C(30.4%) and G(16.2%). Moreover, the 13 protein-coding genes (PCGs) encode 3804 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have a complete stop codon, whereas Cytb ends with the incomplete stop codon represented as a single T. The phylogenetic tree based on the neighbor-Joining method was conducted to provide relationship within Beloniformes, based on 12 PCGs encoded by the heavy strand, the NJ tree demonstrated that H. quoyi has a closest relationship with Hyporhamphus intermedius, which could be a useful basis for propagation of this species.http://dx.doi.org/10.1080/23802359.2018.1532339hyporhamphus quoyimitogenomephylogenetic tree |
| spellingShingle | Kehua Zhu Zhenming Lü Bingjian Liu Li Gong Lihua Jiang Liqin Liu The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae) Mitochondrial DNA. Part B. Resources hyporhamphus quoyi mitogenome phylogenetic tree |
| title | The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae) |
| title_full | The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae) |
| title_fullStr | The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae) |
| title_full_unstemmed | The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae) |
| title_short | The complete mitochondrial genome of Hyporhamphus quoyi (Beloniformes; Hemiramphidae) |
| title_sort | complete mitochondrial genome of hyporhamphus quoyi beloniformes hemiramphidae |
| topic | hyporhamphus quoyi mitogenome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2018.1532339 |
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